RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 RDH12Q96NR8 316 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 OR52B2Q96RD2 323 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 CGREF1Q99674 301 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 ZNF251Q9BRH9 671 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 EXOSC4Q9NPD3 245 aaKnown RBP6.78□□□□□ -1.32
CLCN3-208ENST00000512813 GPR84Q9NQS5 396 aa6.78□□□□□ -1.32
CLCN3-208ENST00000512813 DEFB131BA0A096LNP1 70 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 SH2D1BO14796 132 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 TGOLN2O43493 480 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 CSTBP04080 98 aaKnown RBP6.77□□□□□ -1.33
CLCN3-208ENST00000512813 SCTP09683 121 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 PRKACAP17612 351 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 C21orf33P30042 268 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-208ENST00000512813 IDH3AP50213 366 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 SNU13P55769 128 aaKnown RBP6.77□□□□□ -1.33
CLCN3-208ENST00000512813 STX1BP61266 288 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 ZNF57Q68EA5 555 aaPredicted RBP6.77□□□□□ -1.33
CLCN3-208ENST00000512813 BVESQ8NE79 360 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 OR6N2Q8NGY6 317 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 RFESDQ8TAC1 157 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 OR51E1Q8TCB6 317 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 SNAPC3Q92966 411 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 FAM103A1Q9BTL3 118 aaKnown RBP6.77□□□□□ -1.33
CLCN3-208ENST00000512813 NCOR1P1Q9H4R4 102 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 CCDC167Q9P0B6 97 aa6.77□□□□□ -1.33
CLCN3-208ENST00000512813 IGKV1-27A0A075B6S5 117 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 FAM230AA0A1W2PPH8 454 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 BMPR1BO00238 502 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 SMR3BP02814 79 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-208ENST00000512813 GYPBP06028 91 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 ADMP35318 185 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 SSTR5P35346 364 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 BLVRAP53004 296 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 STX3Q13277 289 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 SPATS1Q496A3 300 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 ZNF767PQ75MW2 155 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 Q8NAQ8 132 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 OR1L6Q8NGR2 347 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 OR6K6Q8NGW6 343 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 OR4A5Q8NH83 315 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 GALNT14Q96FL9 552 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 INTS14Q96SY0 518 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 TEAD3Q99594 435 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 COMMD4Q9H0A8 199 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 SSU72Q9NP77 194 aaKnown RBP6.76□□□□□ -1.33
CLCN3-208ENST00000512813 SPAG4Q9NPE6 437 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 KIF25Q9UIL4 384 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 GAB2Q9UQC2 676 aa6.76□□□□□ -1.33
CLCN3-208ENST00000512813 LRP1Q07954 4544 aaKnown RBP6.75□□□□□ -1.33
CLCN3-208ENST00000512813 MEIKINA0A087WXM9 373 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 ACOD1A6NK06 481 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 SLC33A1O00400 549 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-208ENST00000512813 CALCBP10092 127 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 H2AFXP16104 143 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-208ENST00000512813 SPI1P17947 270 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 BCL3P20749 454 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 SELENOWP63302 87 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 CKAP4Q07065 602 aaKnown RBP6.75□□□□□ -1.33
CLCN3-208ENST00000512813 MED22Q15528 200 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 LRRC23Q53EV4 343 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-208ENST00000512813 LINC01590Q5TEZ4 76 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 SLC25A48Q6ZT89 311 aaKnown RBP6.75□□□□□ -1.33
CLCN3-208ENST00000512813 SHFQ7M4L6 423 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 KCTD20Q7Z5Y7 419 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 ERI1Q8IV48 349 aaKnown RBP6.75□□□□□ -1.33
CLCN3-208ENST00000512813 SLC15A3Q8IY34 581 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 CENPSQ8N2Z9 138 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 CHST4Q8NCG5 386 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 DNAAF1Q8NEP3 725 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 OR51T1Q8NGJ9 327 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 CACNG8Q8WXS5 425 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 NMNAT2Q9BZQ4 307 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 HMG20AQ9NP66 347 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 FAM206AQ9NX38 181 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 SELENOKQ9Y6D0 94 aa6.75□□□□□ -1.33
CLCN3-208ENST00000512813 TRAV25A0A0B4J276 109 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 A0A1W2PRQ8 180 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 MPTX1A8MV57 137 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 LYNP07948 512 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 KITP10721 976 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 ZNF44P15621 663 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 DEFA5Q01523 94 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 DGCR6Q14129 220 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 Q3ZCU0 254 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 SLC37A3Q8NCC5 494 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 OR52M1Q8NGK5 317 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 SCRT1Q9BWW7 348 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 PARP12Q9H0J9 701 aaKnown RBP6.74□□□□□ -1.33
CLCN3-208ENST00000512813 CSTL1Q9H114 145 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 FBXL15Q9H469 300 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 RNF167Q9H6Y7 350 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 PTTG2Q9NZH5 202 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 MLXQ9UH92 298 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 UBQLN2Q9UHD9 624 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 GSTK1Q9Y2Q3 226 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 V9GYS6 101 aa6.74□□□□□ -1.33
CLCN3-208ENST00000512813 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 DHRS7CA6NNS2 312 aa6.73□□□□□ -1.33
CLCN3-208ENST00000512813 FCN1O00602 326 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms