RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 CRTAPO75718 401 aaPredicted RBP12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 FUT3P21217 361 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 GLP1RP43220 463 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 FABP5Q01469 135 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 OR10K2Q6IF99 312 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 RAB12Q6IQ22 244 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 OR9G1Q8NH87 305 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 CCDC107Q8WV48 283 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 CYYR1Q96J86 154 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 Q96M66 194 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 GFI1Q99684 422 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 CITED1Q99966 193 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 YTHDF1Q9BYJ9 559 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 ZNF696Q9H7X3 374 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 RAB18Q9NP72 206 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 ABCB10Q9NRK6 738 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 BLOC1S6Q9UL45 172 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 PSG11Q9UQ72 335 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 SIGLEC9Q9Y336 463 aa12.98□□□□□ -0.33
PDLIM5-216ENST00000511767 WNK1Q9H4A3 2382 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 J3QR06 171 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 SLC22A1O15245 554 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 ORC5O43913 435 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 MRPS14O60783 128 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 UBBP0CG47 229 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 VSIG8P0DPA2 414 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 PSMA1P25786 263 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 QRFPP83859 136 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 RBM39Q14498 530 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 TBCEQ15813 527 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 HLA-DRB5Q30154 266 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 CREB3L1Q96BA8 519 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 AK6Q9Y3D8 172 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 LRRC42Q9Y546 428 aa12.97□□□□□ -0.33
PDLIM5-216ENST00000511767 H3BUI4 141 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 IGHV3-7P01780 117 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 HTR2CP28335 458 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 SSTR5P35346 364 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 SSX1Q16384 188 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 PRR31Q5SQ13 230 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 OR52M1Q8NGK5 317 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 LEAP2Q969E1 77 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 ARL11Q969Q4 196 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 FAM46BQ96A09 425 aa12.96□□□□□ -0.33
PDLIM5-216ENST00000511767 TMEM14DPA8MWL7 114 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 CA11O75493 328 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 ARL6IP5O75915 188 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 MPIG6BO95866 241 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 GABRA5P31644 462 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 EFNB2P52799 333 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 LOXL3P58215 753 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 GABARAPL2P60520 117 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 BLCAPP62952 87 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 LTC4SQ16873 150 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 TPTE2P1Q5T6R2 138 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 SYT6Q5T7P8 510 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 ZNF367Q7RTV3 350 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 TMEM219Q86XT9 240 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 SPARTQ8N0X7 666 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 KCNG3Q8TAE7 436 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 NEK7Q8TDX7 302 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 CST11Q9H112 138 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 MMP28Q9H239 520 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 RANBP3Q9H6Z4 567 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 ETAA1Q9NY74 926 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 PITPNC1Q9UKF7 332 aa12.95□□□□□ -0.34
PDLIM5-216ENST00000511767 UBE2QL1A1L167 161 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 OOSP1A8MZH6 123 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 F2RL2O00254 374 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 CD24P25063 80 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 BRS3P32247 399 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 CEACAM3P40198 252 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 RPS27AP62979 156 aaKnown RBP12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 UNC119Q13432 240 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 FAM53AQ6NSI3 398 aaPredicted RBP12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 CD200R1LQ6Q8B3 271 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 Q6ZS46 218 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 Q8N2B8 174 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 DTX3Q8N9I9 347 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 OR6M1Q8NGM8 313 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 OR4C13Q8NGP0 309 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 OR4K15Q8NH41 348 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 UBALD1Q8TB05 177 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 TM2D1Q9BX74 207 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 NPFFR1Q9GZQ6 430 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 Q9H521 79 aa12.94□□□□□ -0.34
PDLIM5-216ENST00000511767 TRDV1A0A1B0GX56 115 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 A0A1W2PPE3 182 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 C12orf77C9JDV5 145 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 AIPO00170 330 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 SLC17A2O00624 439 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 PDCD6O75340 191 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 BPNT1O95861 308 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 RCC1P18754 421 aaPredicted RBP12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 DIAPH2-AS1Q14236 149 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 UBE2UQ5VVX9 321 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 THNSL2Q86YJ6 484 aa12.93□□□□□ -0.34
PDLIM5-216ENST00000511767 FAM89BQ8N5H3 189 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms