RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 OR8B4Q96RC9 309 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 VAT1Q99536 393 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 C12orf57Q99622 126 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 GABRG3Q99928 467 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 OSBPL11Q9BXB4 747 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 RBKSQ9H477 322 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 DUX4Q9UBX2 424 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 PRO0628Q9UI54 55 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 PRELID3BQ9Y3B1 194 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 GOLT1BQ9Y3E0 138 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 ASB4Q9Y574 426 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 ALG5Q9Y673 324 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 WSB1Q9Y6I7 421 aa2.76□□□□□ -1.97
NUP54-209ENST00000510569 RBBP6Q7Z6E9 1792 aaKnown RBP2.76□□□□□ -1.97
NUP54-209ENST00000510569 PLIN4Q96Q06 1357 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SIPA1L1O43166 1804 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 A0A0G2JMP0 313 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 A0A1B0GV90 55 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 PRORSD1PA6NEY8 169 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 F5H5K5 113 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SMKR1H3BMG3 65 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 K7EP13 123 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 GPR31O00270 319 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ZNF324O75467 553 aaPredicted RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 CYB5R3P00387 301 aaPredicted RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 FBP1P09467 338 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 OR5AL1P0C617 328 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 OR10J4P0C629 311 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 CT45A6P0DMU7 189 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 CT45A5P0DMU8 189 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 CT45A7P0DMV0 189 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ZNF250P15622 560 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 RAB5AP20339 215 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 HIST1H1TP22492 207 aaPredicted RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 S100GP29377 79 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 RPL12P30050 165 aaKnown RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 CA5AP35218 305 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ARL2P36404 184 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 GLP1RP43220 463 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 RORCP51449 518 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 CDKN2DP55273 166 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 DLX1P56177 255 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 TCL1AP56279 114 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 RPL8P62917 257 aaKnown RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 GNG3P63215 75 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 TGFBR3Q03167 851 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 TWF1Q12792 350 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 GINS1Q14691 196 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SLC25A35Q3KQZ1 300 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ARHGAP11BQ3KRB8 267 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 CT45A1Q5HYN5 189 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 VAX1Q5SQQ9 334 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 FAM120AOSQ5T036 256 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 WDR59Q6PJI9 974 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 CXCL17Q6UXB2 119 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ANGPTL5Q86XS5 388 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 DAW1Q8N136 415 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 LRRC18Q8N456 261 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SPICQ8N5J4 248 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ATPAF2Q8N5M1 289 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 DCAF4L2Q8NA75 395 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 GATD1Q8NB37 220 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 OR2Z1Q8NG97 314 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 OR4M2Q8NGB6 313 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 OR8J3Q8NGG0 315 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 OR2G2Q8NGZ5 317 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 OR1P1Q8NH06 330 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 CT45A3Q8NHU0 189 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 Q8WTZ3 238 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SKA2Q8WVK7 121 aaPredicted RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 TCEAL3Q969E4 200 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 EXOSC8Q96B26 276 aaKnown RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 TAMM41Q96BW9 452 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 FGGYQ96C11 551 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 DNAJA3Q96EY1 480 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 PDXPQ96GD0 296 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 PAGE5Q96GU1 130 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SEC22AQ96IW7 307 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SCGB3A2Q96PL1 93 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SMIM14Q96QK8 99 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SORT1Q99523 831 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 PDCD1LG2Q9BQ51 273 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 PECRQ9BY49 303 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SLC19A3Q9BZV2 496 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 PPDPFQ9H3Y8 114 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ZNF385DQ9H6B1 395 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 PTGES2Q9H7Z7 377 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 REEP1Q9H902 201 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 NMNAT1Q9HAN9 279 aaPredicted RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 SIAEQ9HAT2 523 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 TPT1P8Q9HAU6 139 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 MEPEQ9NQ76 525 aaPredicted RBP2.75□□□□□ -1.97
NUP54-209ENST00000510569 DDIT4Q9NX09 232 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 FAM206AQ9NX38 181 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 TAS2R13Q9NYV9 303 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 COMMD9Q9P000 198 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 DKKL1Q9UK85 242 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 SLC35A3Q9Y2D2 325 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 ANKRD31Q8N7Z5 1873 aa2.75□□□□□ -1.97
NUP54-209ENST00000510569 UTRNP46939 3433 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms