RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 ARHGDIBP52566 201 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 WNT4P56705 351 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 CD83Q01151 205 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 ABCA11PQ4W5N1 156 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 ATAD3CQ5T2N8 411 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 FAM53AQ6NSI3 398 aaPredicted RBP14.29□□□□□ -0.12
TPM3-220ENST00000509601 CCDC144NLQ6NUI1 221 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 GLIPR1L1Q6UWM5 242 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 NDUFA11Q86Y39 141 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 OR5AU1Q8NGC0 362 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 CAPSLQ8WWF8 208 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 RPEQ96AT9 228 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 CKLFQ9UBR5 152 aa14.29□□□□□ -0.12
TPM3-220ENST00000509601 A0A1W2PPE3 182 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 A0A1W2PPI3 338 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 TMEM30CPA0ZSE6 113 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 PEX14O75381 377 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 MNDAP41218 407 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 GP2P55259 537 aaKnown RBP14.28□□□□□ -0.12
TPM3-220ENST00000509601 GPR176Q14439 515 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 ARSJQ5FYB0 599 aaPredicted RBP14.28□□□□□ -0.12
TPM3-220ENST00000509601 TCTEX1D4Q5JR98 221 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 RNLSQ5VYX0 342 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 UNQ9370/PRO34162Q6UXP9 181 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 ZNF497Q6ZNH5 498 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 JAGN1Q8N5M9 183 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 CCDC107Q8WV48 283 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 CYYR1Q96J86 154 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 AKR1E2Q96JD6 320 aa14.28□□□□□ -0.12
TPM3-220ENST00000509601 RCC2Q9P258 522 aaKnown RBP14.28□□□□□ -0.12
TPM3-220ENST00000509601 MRPS28Q9Y2Q9 187 aaKnown RBP14.28□□□□□ -0.12
TPM3-220ENST00000509601 MYL12BO14950 172 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 CDK1P06493 297 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 LPLP06858 475 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 FAM106CPP0CH98 169 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 GNG10P50151 68 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 LOXL3P58215 753 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 BEAN1Q3B7T3 259 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 C6orf141Q5SZD1 244 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 SAMD5Q5TGI4 173 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 CENPVQ7Z7K6 275 aaPredicted RBP14.27□□□□□ -0.13
TPM3-220ENST00000509601 DRAM1Q8N682 238 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 OR52M1Q8NGK5 317 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 UBALD1Q8TB05 177 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 TOMM40LQ969M1 308 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 ARL11Q969Q4 196 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 MRPS24Q96EL2 167 aaKnown RBP14.27□□□□□ -0.13
TPM3-220ENST00000509601 DCLRE1BQ9H816 532 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 ERGIC3Q9Y282 383 aa14.27□□□□□ -0.13
TPM3-220ENST00000509601 AMMECR1Q9Y4X0 333 aaPredicted RBP14.27□□□□□ -0.13
TPM3-220ENST00000509601 ORC5O43913 435 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 SNRNP70P08621 437 aaKnown RBP14.26□□□□□ -0.13
TPM3-220ENST00000509601 MADCAM1Q13477 382 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 INSL4Q14641 139 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 GAPTQ8N292 157 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 LINC00311Q8N616 119 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 TMEM104Q8NE00 496 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 OR56B4Q8NH76 319 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 NRG4Q8WWG1 115 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 SGCDQ92629 289 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 R3HDM4Q96D70 268 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 BANF2Q9H503 90 aa14.26□□□□□ -0.13
TPM3-220ENST00000509601 PTGES3LE9PB15 166 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 VHLP40337 213 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 RAB7AP51149 207 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 ACSM3Q53FZ2 586 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 KPRPQ5T749 579 aaPredicted RBP14.25□□□□□ -0.13
TPM3-220ENST00000509601 AWAT2Q6E213 333 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 SIGIRRQ6IA17 410 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 C10orf99Q6UWK7 81 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 SPACA1Q9HBV2 294 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 GFOD1Q9NXC2 390 aa14.25□□□□□ -0.13
TPM3-220ENST00000509601 LSM2Q9Y333 95 aaKnown RBP14.25□□□□□ -0.13
TPM3-220ENST00000509601 MCRIP1C9JLW8 97 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 M0QZK8 103 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 MGMTP16455 207 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 ZNF816Q0VGE8 651 aaPredicted RBP14.24□□□□□ -0.13
TPM3-220ENST00000509601 EBI3Q14213 229 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 HNF4GQ14541 408 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 SYT6Q5T7P8 510 aaPredicted RBP14.24□□□□□ -0.13
TPM3-220ENST00000509601 RAB12Q6IQ22 244 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 OR8H3Q8N146 312 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 C8orf31Q8N9H6 132 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 OR4F17Q8NGA8 305 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 OR10X1Q8NGY0 326 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 NEK7Q8TDX7 302 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 Q96M66 194 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 OR4F4Q96R69 305 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 UQCC2Q9BRT2 126 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 SELENOIQ9C0D9 397 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 PEX16Q9Y5Y5 336 aa14.24□□□□□ -0.13
TPM3-220ENST00000509601 IGHV3-43A0A0B4J1X8 118 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 FAM90A10PA6NDY2 464 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 FAM90A7PA6NKC0 464 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 FAM90A23PA8MXZ1 464 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 C12orf77C9JDV5 145 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 AIPO00170 330 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 SDCBPO00560 298 aaPredicted RBP14.23□□□□□ -0.13
TPM3-220ENST00000509601 SC5DO75845 299 aa14.23□□□□□ -0.13
TPM3-220ENST00000509601 IGHV3-43DP0DP04 118 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms