RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 SERPINA7P05543 415 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 SCTP09683 121 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 S100GP29377 79 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 HLA-DRB3P79483 266 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 Q0VFX4 171 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 MEX3BQ6ZN04 569 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 SLC16A13Q7RTY0 426 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF429Q86V71 674 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 OR5P3Q8WZ94 311 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF845Q96IR2 970 aaPredicted RBP7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 CTDSP1Q9GZU7 261 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 TINAGQ9UJW2 476 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 TRBV24-1A0A075B6N3 115 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 FAM221AA4D161 298 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 SEC14L6B5MCN3 397 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 OR13C7P0DN81 318 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 DAOP14920 347 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 ARR3P36575 388 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 RPL23AP62750 156 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 AKR1C8PQ5T2L2 129 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 FAM90A2PQ658T7 463 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 ADAM5Q6NVV9 412 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 YRDCQ86U90 279 aaKnown RBP7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 OR56B2PQ8NGI1 322 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 EDARADDQ8WWZ3 215 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 NIPSNAP3BQ9BS92 247 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 ABHD14AQ9BUJ0 271 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 NIT2Q9NQR4 276 aa7.88□□□□□ -1.15
PDGFRA-208ENST00000509490 IFITM10A6NMD0 228 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF729A6NN14 1252 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 CHST1O43916 411 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF205O95201 554 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF806P0C7X5 589 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 TAGLN2P37802 199 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 HAGHQ16775 308 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 BRICD5Q6PL45 260 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 STX12Q86Y82 276 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF610Q8N9Z0 462 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 POM121L2Q96KW2 1035 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 MIOXQ9UGB7 285 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 WRBO00258 174 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 RFPL3SP0C7P2 107 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 NQO2P16083 231 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 UBE2KP61086 200 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 DLK1P80370 383 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 SSPNQ14714 243 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 ZFP62Q8NB50 900 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 Q8WTZ3 238 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 PCSK5Q92824 1860 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 PINX1Q96BK5 328 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 GPR146Q96CH1 333 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 PYGO2Q9BRQ0 406 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 C20orf24Q9BUV8 137 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 GGACTQ9BVM4 153 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 CALHM2Q9HA72 323 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 CCL28Q9NRJ3 127 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 COLQQ9Y215 455 aaPredicted RBP7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 LIPGQ9Y5X9 500 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 ASCC3Q8N3C0 2202 aaKnown RBP7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 SHANK1Q9Y566 2161 aa7.87□□□□□ -1.15
PDGFRA-208ENST00000509490 TRAPPC2LH3BP13 241 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 WISP2O76076 250 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 IGLV2-14P01704 120 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 BCL2P10415 239 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 PAX1P15863 534 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 LHX2P50458 406 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 TGIF1Q15583 401 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 LRRC75BQ2VPJ9 315 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF573Q86YE8 665 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 SLAMF9Q96A28 289 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 ZPBPQ9BS86 351 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 SPRY4Q9C004 299 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 DEPPQ9NTK1 212 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 BOKQ9UMX3 212 aaPredicted RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 PUS1Q9Y606 427 aaKnown RBP eCLIP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 MYO9BQ13459 2157 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 CDRT15L2A8MXV6 281 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 CYB5R3P00387 301 aaPredicted RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 PATE4P0C8F1 98 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 ARF1P84077 181 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 KIAA0141Q14154 515 aaPredicted RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 ACER2Q5QJU3 275 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 Q6P435 159 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 ZNF525Q8N782 197 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 CYB561D1Q8N8Q1 229 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 CA5BP1Q8WTZ4 195 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 PSMF1Q92530 271 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 JSRP1Q96MG2 331 aaPredicted RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 TRAV24A0A0B4J272 114 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 IFNA5P01569 189 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 P0C879 139 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 CCL4P13236 92 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 NOVA1P51513 510 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 CLDN18P56856 261 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 ZBTB34Q8NCN2 500 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 MBNL3Q9NUK0 354 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 NOSIPQ9Y314 301 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 WIPI2Q9Y4P8 454 aa7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 SPTBN5Q9NRC6 3674 aaKnown RBP7.86□□□□□ -1.15
PDGFRA-208ENST00000509490 XIRP2A4UGR9 3374 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms