RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 DUX4L7P0CJ90 424 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 BCL3P20749 454 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 CHATP28329 748 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 VEGFCP49767 419 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 IL13RA2Q14627 380 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 ARL6IP1Q15041 203 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 MPV17LQ2QL34 196 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 PDLIM3Q53GG5 364 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-208ENST00000509389 DUX4L9Q6RFH8 374 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-208ENST00000509389 LINC00596Q86U02 117 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 OR10Z1Q8NGY1 313 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 OR52I2Q8NH67 350 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 LRRC29Q8WV35 223 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 DEDD2Q8WXF8 326 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 SLAMF9Q96A28 289 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 CCL13Q99616 98 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 THAP7Q9BT49 309 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-208ENST00000509389 SELENOIQ9C0D9 397 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 DUX4Q9UBX2 424 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 MTFP1Q9UDX5 166 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 ZNF107Q9UII5 783 aaPredicted RBP11.98□□□□□ -0.49
HMGCL-208ENST00000509389 RPUSD1Q9UJJ7 312 aaKnown RBP11.98□□□□□ -0.49
HMGCL-208ENST00000509389 VWFP04275 2813 aa11.98□□□□□ -0.49
HMGCL-208ENST00000509389 NOTCH1P46531 2555 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 MEIOCA2RUB1 952 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 PLA2G10O15496 165 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 RHBDL1O75783 438 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 HTR3BO95264 441 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 PTTG1O95997 202 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 CYB5AP00167 134 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 PTHLHP12272 177 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 MUC1P15941 1255 aaPredicted RBP11.97□□□□□ -0.49
HMGCL-208ENST00000509389 KRTAP10-3P60369 221 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 RPL15P61313 204 aaKnown RBP11.97□□□□□ -0.49
HMGCL-208ENST00000509389 SCN1BQ07699 218 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 KLF9Q13886 244 aaPredicted RBP11.97□□□□□ -0.49
HMGCL-208ENST00000509389 OXA1LQ15070 435 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 PNLIPRP3Q17RR3 467 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 MICBQ29980 383 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 TRIQKQ629K1 86 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 WDR82Q6UXN9 313 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 RTN4RL2Q86UN3 420 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 PDZD9Q8IXQ8 264 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 OR8H2Q8N162 312 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 DYRK2Q92630 601 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 PHF21AQ96BD5 680 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 RAB3CQ96E17 227 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 SEH1LQ96EE3 360 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 CITED1Q99966 193 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 RBFOX1Q9NWB1 397 aaKnown RBP11.97□□□□□ -0.49
HMGCL-208ENST00000509389 MRPS7Q9Y2R9 242 aaKnown RBP11.97□□□□□ -0.49
HMGCL-208ENST00000509389 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
HMGCL-208ENST00000509389 ANKRD20A5PA0PJZ0 165 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 TMEM235A6NFC5 223 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 SERPINE3A8MV23 424 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.96□□□□□ -0.49
HMGCL-208ENST00000509389 GPR137BO60478 399 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 IGHV4-59P01825 116 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 LPLP06858 475 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 GDNFP39905 211 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 IER3P46695 156 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 DYRK1AQ13627 763 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 RGS21Q2M5E4 152 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 PIGYQ3MUY2 71 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 BRICD5Q6PL45 260 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 Q6ZTK2 550 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 VMO1Q7Z5L0 202 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 LDLRAD3Q86YD5 345 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 FAM216BQ8N7L0 139 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 MINDY2Q8NBR6 621 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 LY6G5BQ8NDX9 201 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 SEBOXQ9HB31 216 aaPredicted RBP11.96□□□□□ -0.49
HMGCL-208ENST00000509389 ELL3Q9HB65 397 aaPredicted RBP11.96□□□□□ -0.49
HMGCL-208ENST00000509389 ST3GAL6Q9Y274 331 aa11.96□□□□□ -0.49
HMGCL-208ENST00000509389 CDIPTO14735 213 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 GEMIN2O14893 280 aaKnown RBP11.95□□□□□ -0.5
HMGCL-208ENST00000509389 ORC5O43913 435 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 SSX5O60225 188 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 PDCD6O75340 191 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 CD3GP09693 182 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 AMY2BP19961 511 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 PRSS3P35030 304 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 ZNF146Q15072 292 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 MIDNQ504T8 468 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 SLC36A1Q7Z2H8 476 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 LINC01006Q8NI28 216 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 FCAMRQ8WWV6 532 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 ARHGAP5-AS1Q96IT6 56 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 PECRQ9BY49 303 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 ONECUT1Q9UBC0 465 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 RNF114Q9Y508 228 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 DSCAML1Q8TD84 2053 aa11.95□□□□□ -0.5
HMGCL-208ENST00000509389 GNB3P16520 340 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 NAT1P18440 290 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 BLVRBP30043 206 aaPredicted RBP11.94□□□□□ -0.5
HMGCL-208ENST00000509389 BTCP35070 178 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 RFX2P48378 723 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 DEFA1P59665 94 aa11.94□□□□□ -0.5
HMGCL-208ENST00000509389 DEFA3P59666 94 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms