RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 C1orf122Q6ZSJ8 110 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 WFDC3Q8IUB2 231 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 OSR2Q8N2R0 312 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 MS4A15Q8N5U1 240 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 NKAIN3Q8N8D7 197 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 CORO2AQ92828 525 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 LEAP2Q969E1 77 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 KIRREL1Q96J84 757 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF714Q96N38 554 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 MYCBPQ99417 103 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 GPER1Q99527 375 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 SULT4A1Q9BR01 284 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 HDHD3Q9BSH5 251 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 DPCDQ9BVM2 203 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 TM2D1Q9BX74 207 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 METTL9Q9H1A3 318 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 LPAR5Q9H1C0 372 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 OR51E2Q9H255 320 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF696Q9H7X3 374 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 TNFRSF19Q9NS68 423 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 ST3GAL6Q9Y274 331 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 SESN1Q9Y6P5 492 aa5.82□□□□□ -1.48
TOPBP1-207ENST00000509162 KIAA2026Q5HYC2 2103 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 PKD1L1Q8TDX9 2849 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 A0A087X0M5 115 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 A0A0A6YYJ9 748 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 IGHV2-26A0A0B4J1V2 119 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 A0A1B0GX30 115 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 NPIPB11E5RHQ5 1161 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC17A2O00624 439 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC31A2O15432 143 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 MRPS14O60783 128 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 OR7C1O76099 320 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 IGLV1-47P01700 117 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 RBP4P02753 201 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 OCMP0CE72 109 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 GADD45AP24522 165 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 EEF1B2P24534 225 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 CDK2P24941 298 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 CFPP27918 469 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 PSMB9P28065 219 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 HTR2CP28335 458 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 CD34P28906 385 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 GLP1RP43220 463 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 IER3P46695 156 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 UBE2E1P51965 193 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM50BP56557 158 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 RPS27AP62979 156 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 MEF2CQ06413 473 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 SCN1BQ07699 218 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 BAMBIQ13145 260 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 GNMTQ14749 295 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 RSU1Q15404 277 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 NEDD8Q15843 81 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 PLA1AQ53H76 456 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 KRBOX4Q5JUW0 171 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 SYT6Q5T7P8 510 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 HES5Q5TA89 166 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 C22orf42Q6IC83 251 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 FIP1L1Q6UN15 594 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF497Q6ZNH5 498 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 GDPD3Q7L5L3 318 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 CDH26Q8IXH8 852 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 CHST4Q8NCG5 386 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 OR11H6Q8NGC7 330 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 MRPL30Q8TCC3 161 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 MRGPRDQ8TDS7 321 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 ZNF418Q8TF45 676 aaPredicted RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 FAM216AQ8WUB2 273 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 YIPF6Q96EC8 236 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 UQCC2Q9BRT2 126 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 PARP12Q9H0J9 701 aaKnown RBP5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 LINC00574Q9H8X3 128 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 RHOFQ9HBH0 211 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 CALYQ9NYX4 217 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 C1RLQ9NZP8 487 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 BLOC1S6Q9UL45 172 aa5.81□□□□□ -1.48
TOPBP1-207ENST00000509162 DNAH9Q9NYC9 4486 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM272A0A1B0GTI8 110 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 TRDV1A0A1B0GX56 115 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 hADV38S2A0JD32 116 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 MEIOCA2RUB1 952 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 TMEM89A2RUT3 159 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 C12orf77C9JDV5 145 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 LY6LH3BQJ8 138 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 CCRL2O00421 344 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 SH2D1BO14796 132 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 DEGS1O15121 323 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 SOCS1O15524 211 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 RRP9O43818 475 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 GPR137BO60478 399 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 CRTAPO75718 401 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 MPIG6BO95866 241 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 IL1AP01583 271 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 IGHV3-7P01780 117 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 HKR1P10072 659 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 SLC2A2P11168 524 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 SRMP19623 302 aa5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 MDKP21741 143 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-207ENST00000509162 MAPK3P27361 379 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms