RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 FAM106CPP0CH98 169 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 HSPA13P48723 471 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 GNG10P50151 68 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 GPR50Q13585 617 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 HABP2Q14520 560 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-207ENST00000509102 ACSM3Q53FZ2 586 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 C11orf44Q8N8P7 122 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 FAM110DQ8TAY7 271 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-207ENST00000509102 UFD1Q92890 307 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 SLC25A33Q9BSK2 321 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 TMED9Q9BVK6 235 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 SELENOIQ9C0D9 397 aa14.97□□□□□ -0.01
UBE3D-207ENST00000509102 TET2Q6N021 2002 aaPredicted RBP14.97□□□□□ -0.01
UBE3D-207ENST00000509102 TSPAN15O95858 294 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 UBBP0CG47 229 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 MGMTP16455 207 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 RAB7AP51149 207 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 GLT8D1Q68CQ7 371 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 RAB12Q6IQ22 244 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 NRG4Q8WWG1 115 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 CFHR4Q92496 578 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 ARL11Q969Q4 196 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 SERTAD4Q9NUC0 356 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 ETAA1Q9NY74 926 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 TRAPPC2LQ9UL33 140 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 PSG11Q9UQ72 335 aa14.96□□□□□ -0.01
UBE3D-207ENST00000509102 TRAV39A0A0B4J263 110 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 ERICH4A6NGS2 130 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 LY6LH3BQJ8 138 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 SDCBPO00560 298 aaPredicted RBP14.95□□□□□ -0.02
UBE3D-207ENST00000509102 SPINT2O43291 252 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 ORC5O43913 435 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 CA11O75493 328 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 OR2F2O95006 317 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 IGHV3-7P01780 117 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 MYF6P23409 242 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 CD24P25063 80 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 BLCAPP62952 87 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 RBM48Q5RL73 367 aaKnown RBP14.95□□□□□ -0.02
UBE3D-207ENST00000509102 C6orf183Q5T699 404 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 TRAT1Q6PIZ9 186 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 ZNF497Q6ZNH5 498 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 OR52M1Q8NGK5 317 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 CCDC107Q8WV48 283 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 PHYHIPQ92561 330 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 LEAP2Q969E1 77 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 RBM14Q96PK6 669 aaKnown RBP14.95□□□□□ -0.02
UBE3D-207ENST00000509102 OR5M11Q96RB7 305 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 ANKRD60Q9BZ19 345 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 BANF2Q9H503 90 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 ZNF581Q9P0T4 197 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 RCC2Q9P258 522 aaKnown RBP14.95□□□□□ -0.02
UBE3D-207ENST00000509102 PEX16Q9Y5Y5 336 aa14.95□□□□□ -0.02
UBE3D-207ENST00000509102 WNK1Q9H4A3 2382 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 PIN1P1O15428 100 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 RGS10O43665 173 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 MT-ND4P03905 459 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 GLAP06280 429 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 FUT3P21217 361 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 IL3RAP26951 378 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 SLC35A2P78381 396 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 TMEM30BQ3MIR4 351 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 HSD17B12Q53GQ0 312 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 CEACAM19Q7Z692 300 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 OR8H3Q8N146 312 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 CCDC90BQ9GZT6 254 aa14.94□□□□□ -0.02
UBE3D-207ENST00000509102 LPLP06858 475 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 HSMCR30P0CW71 290 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 DEFA6Q01524 100 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 EMX1Q04741 257 aaPredicted RBP14.93□□□□□ -0.02
UBE3D-207ENST00000509102 HES1Q14469 280 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 TRAM1Q15629 374 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 ABCA11PQ4W5N1 156 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 THNSL2Q86YJ6 484 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 FAM46BQ96A09 425 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 BLOC1S6Q9UL45 172 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 LSM2Q9Y333 95 aaKnown RBP14.93□□□□□ -0.02
UBE3D-207ENST00000509102 VWFP04275 2813 aa14.93□□□□□ -0.02
UBE3D-207ENST00000509102 SRMP19623 302 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 PSMA1P25786 263 aaKnown RBP14.92□□□□□ -0.02
UBE3D-207ENST00000509102 Q3ZCU0 254 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 SYT6Q5T7P8 510 aaPredicted RBP14.92□□□□□ -0.02
UBE3D-207ENST00000509102 LIPKQ5VXJ0 399 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 UNQ9370/PRO34162Q6UXP9 181 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 IZUMO2Q6UXV1 221 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 TMEM104Q8NE00 496 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 OR56B4Q8NH76 319 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 Q96M66 194 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 DUSP21Q9H596 190 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 KCNIP1Q9NZI2 227 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 GNG12Q9UBI6 72 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 MOB4Q9Y3A3 225 aa14.92□□□□□ -0.02
UBE3D-207ENST00000509102 C15orf65H3BRN8 121 aa14.91□□□□□ -0.02
UBE3D-207ENST00000509102 CCRL2O00421 344 aa14.91□□□□□ -0.02
UBE3D-207ENST00000509102 HSD17B6O14756 317 aa14.91□□□□□ -0.02
UBE3D-207ENST00000509102 PDCD6O75340 191 aa14.91□□□□□ -0.02
UBE3D-207ENST00000509102 ARL6IP5O75915 188 aa14.91□□□□□ -0.02
UBE3D-207ENST00000509102 MPIG6BO95866 241 aa14.91□□□□□ -0.02
UBE3D-207ENST00000509102 GAPDHP04406 335 aaKnown RBP14.91□□□□□ -0.02
UBE3D-207ENST00000509102 RANBP1P43487 201 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms