RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 SLC38A2Q96QD8 506 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 TSPAN32Q96QS1 320 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 AIF1LQ9BQI0 150 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 MS4A8Q9BY19 250 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 OR51B5Q9H339 312 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 LRRC40Q9H9A6 602 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 EDA2RQ9HAV5 297 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 PARVBQ9HBI1 364 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 DYNLRB1Q9NP97 96 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 FBXO6Q9NRD1 293 aaPredicted RBP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 MAT2BQ9NZL9 334 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF639Q9UID6 485 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 ASB4Q9Y574 426 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 INSIG2Q9Y5U4 225 aa2.25□□□□□ -2.05
TOPBP1-206ENST00000508524 IGLV3-32A0A0A0MS00 114 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 A0A0A6YYD5 115 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 IGHV2OR16-5A0A0B4J2B6 119 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 A0A1B0GW55 424 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF716A6NP11 495 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 E5RI56 91 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 APOC4-APOC2K7ER74 178 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 PLPP1O14494 284 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 ACOX3O15254 700 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 TBX19O60806 448 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 H6PDO95479 791 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 APOC2P02655 101 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 CCDC172P0C7W6 258 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 DUX4L2P0CJ85 424 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 DUX4L3P0CJ86 424 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 DUX4L5P0CJ88 424 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 DUX4L6P0CJ89 424 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 DUX4L7P0CJ90 424 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 C1GALT1C1LP0DN25 315 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 PPICP45877 212 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 RFX3P48380 749 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 EVX1P49640 407 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 TMEM33P57088 247 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 CARD18P57730 90 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 EIF3EP60228 445 aaKnown RBP2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 RAB10P61026 200 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 CCL8P80075 99 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 CDK16Q00536 496 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 FOXF1Q12946 379 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 TFDP2Q14188 446 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 PRPSAP1Q14558 356 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 TOMM34Q15785 309 aaPredicted RBP2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 SBSPONQ8IVN8 264 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 C1orf174Q8IYL3 243 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 OTUD6BQ8N6M0 293 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 OR52R1Q8NGF1 315 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 OR52E2Q8NGJ4 325 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 OR5D13Q8NGL4 314 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 OR4S2Q8NH73 311 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 MAGEE2Q8TD90 523 aaPredicted RBP2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 RAB8BQ92930 207 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 ALS2CR12Q96Q35 445 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 RHOXF2Q9BQY4 288 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 TPPP3Q9BW30 176 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF442Q9H7R0 627 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 UBAP1Q9NZ09 502 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 DUX4Q9UBX2 424 aa2.24□□□□□ -2.05
TOPBP1-206ENST00000508524 M0R233 179 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 ARPC3O15145 178 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 DEDDO75618 318 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 TTC4O95801 387 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 LHBP01229 141 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 IFNB1P01574 187 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 IGHMP01871 453 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 FABP3P05413 133 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 KRT8P05787 483 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 SLC2A5P22732 501 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 FDFT1P37268 417 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 SLC1A2P43004 574 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 SSR2P43308 183 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 KIR3DL2P43630 455 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 XKP51811 444 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 FOXA1P55317 472 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 GPX6P59796 221 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 TRIP13Q15645 432 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 TMEM176BQ3YBM2 270 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 CLEC6AQ6EIG7 209 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 PPP1R2P3Q6NXS1 205 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 PUSL1Q8N0Z8 303 aaKnown RBP2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 UBE2J2Q8N2K1 259 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 TBC1D19Q8N5T2 526 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 TMEM86BQ8N661 226 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 ATP6V1C2Q8NEY4 427 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 NOXO1Q8NFA2 376 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 OR7G1Q8NGA0 311 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 CPNE4Q96A23 557 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 TRIM44Q96DX7 344 aaPredicted RBP2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 WDR34Q96EX3 536 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 OR8B4Q96RC9 309 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF382Q96SR6 550 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 SORT1Q99523 831 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 CES1P1Q9UKY3 287 aa2.23□□□□□ -2.05
TOPBP1-206ENST00000508524 DNAH5Q8TE73 4624 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 UTS2O95399 124 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 OPN1SWP03999 348 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms