RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 PGLYRP3Q96LB9 341 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF184Q99676 751 aaPredicted RBP10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 BABAM2Q9NXR7 383 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 ING4Q9UNL4 249 aa10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 EXOSC1Q9Y3B2 195 aaKnown RBP10.3□□□□□ -0.76
HMGCS1-205ENST00000508319 DNAH9Q9NYC9 4486 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 TMEM30CPA0ZSE6 113 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 IRGMA1A4Y4 181 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 PSMB11A5LHX3 300 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 BAG2O95816 211 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 IGKV1D-33P01593 117 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 IGKV1-33P01594 117 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 CSTBP04080 98 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 TMEM11P17152 192 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 MYL12AP19105 171 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 FSTP19883 344 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 RPS11P62280 158 aaKnown RBP eCLIP10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF816Q0VGE8 651 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 MPV17LQ2QL34 196 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF329Q86UD4 541 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 LINC00482Q8N8I6 264 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 UBALD1Q8TB05 177 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 GHSRQ92847 366 aa10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 RCC1LQ96I51 464 aaKnown RBP10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 NOL4LQ96MY1 436 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 PAK1IP1Q9NWT1 392 aaPredicted RBP10.29□□□□□ -0.76
HMGCS1-205ENST00000508319 TRAV8-7A0A075B6U6 113 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 IGHV1-3A0A0C4DH29 117 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 CCRL2O00421 344 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF780AO75290 641 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 GPX5O75715 221 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 GZMHP20718 246 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 REG1BP48304 166 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 RPL23AP62750 156 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 EBI3Q14213 229 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 HNF4GQ14541 408 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 Q499Y3 187 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 SLC22A6Q4U2R8 563 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 YIF1BQ5BJH7 314 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 FAM53AQ6NSI3 398 aaPredicted RBP10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 ZNF497Q6ZNH5 498 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 IZUMO1Q8IYV9 350 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 LINC00311Q8N616 119 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 ZFP41Q8N8Y5 198 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 CHPT1Q8WUD6 406 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 OR14A2Q96R54 314 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 S100A13Q99584 98 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 GFOD1Q9NXC2 390 aa10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 RCC2Q9P258 522 aaKnown RBP10.28□□□□□ -0.76
HMGCS1-205ENST00000508319 TRBV5-7A0A0A0MS05 114 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 EBAG9O00559 213 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 SDCBPO00560 298 aaPredicted RBP10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 MPIG6BO95866 241 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 IGHG2P01859 326 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 GTF2F2P13984 249 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 KRTAP10-11P60412 298 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 DOC2BQ14184 412 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 LRRC36Q1X8D7 754 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 ATAD3CQ5T2N8 411 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 OR2W3Q7Z3T1 314 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 MRPL41Q8IXM3 137 aaKnown RBP10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 Q8N6K4 173 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 C8orf31Q8N9H6 132 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 OR52M1Q8NGK5 317 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 CCDC107Q8WV48 283 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 CYGBQ8WWM9 190 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 ARL11Q969Q4 196 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 MUL1Q969V5 352 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 TMEM80Q96HE8 168 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 CKLFQ9UBR5 152 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 LINC00527Q9UJ94 153 aa10.27□□□□□ -0.77
HMGCS1-205ENST00000508319 IGHV3-43A0A0B4J1X8 118 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 SERPINE3A8MV23 424 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 C12orf77C9JDV5 145 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 K7EIL1 84 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 ORC5O43913 435 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 DUS4LO95620 317 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 MT-ND4P03905 459 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 GAPDHP04406 335 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 IGHV3-43DP0DP04 118 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 ADARB1P78563 741 aaKnown RBP10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 EGFEM1PQ0D2K5 195 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 TTC23Q5W5X9 447 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 LAIR2Q6ISS4 152 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 C18orf65Q6ZTR6 163 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 SLC35E3Q7Z769 313 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 LYPD6Q86Y78 171 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 TGIF2LXQ8IUE1 241 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 GAPTQ8N292 157 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 ZNF439Q8NDP4 499 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 TMEM104Q8NE00 496 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 SETD9Q8NE22 299 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 OR51D1Q8NGF3 324 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 NEK7Q8TDX7 302 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 RTN4IP1Q8WWV3 396 aaPredicted RBP10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 GGHQ92820 318 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 ST6GALNAC6Q969X2 333 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 CYYR1Q96J86 154 aa10.26□□□□□ -0.77
HMGCS1-205ENST00000508319 EAF1Q96JC9 268 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms