RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 H3BUI4 141 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 MYL12BO14950 172 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 CASQ2O14958 399 aaPredicted RBP11.37□□□□□ -0.59
RAB28-205ENST00000508274 PIN1P1O15428 100 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 MAS1P04201 325 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 SNRNP70P08621 437 aaKnown RBP11.37□□□□□ -0.59
RAB28-205ENST00000508274 GTF2F2P13984 249 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 LINC00596Q86U02 117 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 STX19Q8N4C7 294 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 JAGN1Q8N5M9 183 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 DRAM1Q8N682 238 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 BPIFB6Q8NFQ5 453 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 DERL3Q96Q80 235 aa11.37□□□□□ -0.59
RAB28-205ENST00000508274 PAK1IP1Q9NWT1 392 aaPredicted RBP11.37□□□□□ -0.59
RAB28-205ENST00000508274 MRPS28Q9Y2Q9 187 aaKnown RBP11.37□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 C15orf65H3BRN8 121 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 ZNF780AO75290 641 aaPredicted RBP11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 CELP19835 753 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 WNT4P56705 351 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 TAS2R43P59537 309 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 CD83Q01151 205 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 EMX1Q04741 257 aaPredicted RBP11.36□□□□□ -0.59
RAB28-205ENST00000508274 MADCAM1Q13477 382 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 INSL4Q14641 139 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 OXLD1Q5BKU9 147 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 C9orf152Q5JTZ5 239 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 GLIPR1L1Q6UWM5 242 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 CENPVQ7Z7K6 275 aaPredicted RBP11.36□□□□□ -0.59
RAB28-205ENST00000508274 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 NEK7Q8TDX7 302 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 ARL11Q969Q4 196 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 OR4F4Q96R69 305 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 BANF2Q9H503 90 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 MOB4Q9Y3A3 225 aa11.36□□□□□ -0.59
RAB28-205ENST00000508274 IGHV3-43A0A0B4J1X8 118 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 FAM106CPP0CH98 169 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 IGHV3-43DP0DP04 118 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 VHLP40337 213 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 KPRPQ5T749 579 aaPredicted RBP11.35□□□□□ -0.59
RAB28-205ENST00000508274 AWAT2Q6E213 333 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 ZNF497Q6ZNH5 498 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 OR10A7Q8NGE5 316 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 OR10X1Q8NGY0 326 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 PCDHB16Q9NRJ7 776 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 PLCXD1Q9NUJ7 323 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 FKBP14Q9NWM8 211 aa11.35□□□□□ -0.59
RAB28-205ENST00000508274 RCC2Q9P258 522 aaKnown RBP11.35□□□□□ -0.59
RAB28-205ENST00000508274 AIPO00170 330 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 SDCBPO00560 298 aaPredicted RBP11.34□□□□□ -0.59
RAB28-205ENST00000508274 HSD17B6O14756 317 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 IGKV1D-33P01593 117 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 IGKV1-33P01594 117 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 REG1BP48304 166 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 HES1Q14469 280 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 HNF4GQ14541 408 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 LYPD6Q86Y78 171 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 NANOGP1Q8N7R0 232 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 TMEM104Q8NE00 496 aa11.34□□□□□ -0.59
RAB28-205ENST00000508274 IGHV3-72A0A0B4J1Y9 119 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 MT-ND4P03905 459 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 TMEM11P17152 192 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 GZMHP20718 246 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 RAB7AP51149 207 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 LOXL3P58215 753 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 GPR176Q14439 515 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 FAM27D1Q5T7N8 215 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 SLC16A12Q6ZSM3 486 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 OR8H3Q8N146 312 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 OR4K15Q8NH41 348 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 SGCDQ92629 289 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 MYDGFQ969H8 173 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 RBMXL1Q96E39 390 aaKnown RBP11.33□□□□□ -0.6
RAB28-205ENST00000508274 GFOD1Q9NXC2 390 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 PLA2G2EQ9NZK7 142 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 NKX1-2Q9UD57 310 aaPredicted RBP11.33□□□□□ -0.6
RAB28-205ENST00000508274 DNAH3Q8TD57 4116 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 TCRBV4S1A1TA0A5B7 111 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 M0QZK8 103 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 SLC31A2O15432 143 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 CD1AP06126 327 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 MGMTP16455 207 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 GP2P55259 537 aaKnown RBP11.33□□□□□ -0.6
RAB28-205ENST00000508274 SYT6Q5T7P8 510 aaPredicted RBP11.33□□□□□ -0.6
RAB28-205ENST00000508274 SIGIRRQ6IA17 410 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 RAB12Q6IQ22 244 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 SELENOIQ9C0D9 397 aa11.33□□□□□ -0.6
RAB28-205ENST00000508274 IGHV1-3A0A0C4DH29 117 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms