RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 ATAD3CQ5T2N8 411 aa16.53■□□□□ 0.24
CLDND1-216ENST00000507944 FOXB2Q5VYV0 432 aa16.53■□□□□ 0.24
CLDND1-216ENST00000507944 TTC23Q5W5X9 447 aa16.53■□□□□ 0.24
CLDND1-216ENST00000507944 DMKNQ6E0U4 476 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-216ENST00000507944 LINC00596Q86U02 117 aa16.53■□□□□ 0.24
CLDND1-216ENST00000507944 ZNF184Q99676 751 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-216ENST00000507944 AURKAIP1Q9NWT8 199 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-216ENST00000507944 DNAH3Q8TD57 4116 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 PSMB11A5LHX3 300 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 GPX5O75715 221 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 HNF4GQ14541 408 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 MPV17LQ2QL34 196 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 Q499Y3 187 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 SLC22A6Q4U2R8 563 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 SETD9Q8NE22 299 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 CKLFQ9UBR5 152 aa16.52■□□□□ 0.24
CLDND1-216ENST00000507944 A0A1W2PP11 408 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 C15orf65H3BRN8 121 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 GTF2F2P13984 249 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 RPS11P62280 158 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLDND1-216ENST00000507944 YIF1BQ5BJH7 314 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 C5orf56Q8N8D9 126 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 ZFP41Q8N8Y5 198 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 NEK7Q8TDX7 302 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 CCDC107Q8WV48 283 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 GGHQ92820 318 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 ARL11Q969Q4 196 aa16.51■□□□□ 0.23
CLDND1-216ENST00000507944 MAGEA13PA6NCF6 341 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 FGF16O43320 207 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 IGKV1D-33P01593 117 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 IGKV1-33P01594 117 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 GAPDHP04406 335 aaKnown RBP16.5■□□□□ 0.23
CLDND1-216ENST00000507944 GPR176Q14439 515 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 ZNF329Q86UD4 541 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 DHRSXQ8N5I4 330 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 ZNF485Q8NCK3 441 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 OR52M1Q8NGK5 317 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 UBALD1Q8TB05 177 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 PGLYRP3Q96LB9 341 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 C8orf4Q9NR00 106 aa16.5■□□□□ 0.23
CLDND1-216ENST00000507944 TRAV8-7A0A075B6U6 113 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 CCRL2O00421 344 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 SDCBPO00560 298 aaPredicted RBP16.49■□□□□ 0.23
CLDND1-216ENST00000507944 HSD17B6O14756 317 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 ORC5O43913 435 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 MT-ND4P03905 459 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 SLC35A2P78381 396 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 ADARB1P78563 741 aaKnown RBP16.49■□□□□ 0.23
CLDND1-216ENST00000507944 ZNF816Q0VGE8 651 aaPredicted RBP16.49■□□□□ 0.23
CLDND1-216ENST00000507944 ST3GAL4Q11206 333 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 ZNF497Q6ZNH5 498 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 MOB3BQ86TA1 216 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 STX19Q8N4C7 294 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 PACRGLQ8N7B6 248 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 CHPT1Q8WUD6 406 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 NOL4LQ96MY1 436 aaPredicted RBP16.49■□□□□ 0.23
CLDND1-216ENST00000507944 GFOD1Q9NXC2 390 aa16.49■□□□□ 0.23
CLDND1-216ENST00000507944 TRBV5-7A0A0A0MS05 114 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 IGHV1-3A0A0C4DH29 117 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 A0A1W2PPK0 400 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 FSTP19883 344 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 REG1BP48304 166 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 EBI3Q14213 229 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 JAGN1Q8N5M9 183 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 LINC00311Q8N616 119 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 MUL1Q969V5 352 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 RCC1LQ96I51 464 aaKnown RBP16.48■□□□□ 0.23
CLDND1-216ENST00000507944 OR14A2Q96R54 314 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 SPACA1Q9HBV2 294 aa16.48■□□□□ 0.23
CLDND1-216ENST00000507944 MRPS28Q9Y2Q9 187 aaKnown RBP16.48■□□□□ 0.23
CLDND1-216ENST00000507944 IGHV3-43A0A0B4J1X8 118 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 SERPINE3A8MV23 424 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 MCRIP1C9JLW8 97 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 AIPO00170 330 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 IGHV3-43DP0DP04 118 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 TAS2R43P59537 309 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 FAM53AQ6NSI3 398 aaPredicted RBP16.47■□□□□ 0.23
CLDND1-216ENST00000507944 GLIPR1L1Q6UWM5 242 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 C8orf31Q8N9H6 132 aa16.47■□□□□ 0.23
CLDND1-216ENST00000507944 MRPS24Q96EL2 167 aaKnown RBP16.47■□□□□ 0.23
CLDND1-216ENST00000507944 EAF1Q96JC9 268 aaPredicted RBP16.47■□□□□ 0.23
CLDND1-216ENST00000507944 IGHV3-72A0A0B4J1Y9 119 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 PNMA8CA0A1B0GUJ8 204 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 EFCAB10A6NFE3 127 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 IGHG2P01859 326 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 SLC35E3Q7Z769 313 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 CDH26Q8IXH8 852 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 RCC2Q9P258 522 aaKnown RBP16.46■□□□□ 0.23
CLDND1-216ENST00000507944 LINC00527Q9UJ94 153 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 TRAPPC2LQ9UL33 140 aa16.46■□□□□ 0.23
CLDND1-216ENST00000507944 NCBP2LA6PVI3 153 aaKnown RBP16.45■□□□□ 0.22
CLDND1-216ENST00000507944 DUS4LO95620 317 aaKnown RBP16.45■□□□□ 0.22
CLDND1-216ENST00000507944 MPIG6BO95866 241 aa16.45■□□□□ 0.22
CLDND1-216ENST00000507944 MAS1P04201 325 aa16.45■□□□□ 0.22
CLDND1-216ENST00000507944 IL3RAP26951 378 aa16.45■□□□□ 0.22
CLDND1-216ENST00000507944 RPL23AP62750 156 aaKnown RBP16.45■□□□□ 0.22
CLDND1-216ENST00000507944 Q3ZCU0 254 aa16.45■□□□□ 0.22
CLDND1-216ENST00000507944 SYT6Q5T7P8 510 aaPredicted RBP16.45■□□□□ 0.22
CLDND1-216ENST00000507944 AWAT2Q6E213 333 aa16.45■□□□□ 0.22
CLDND1-216ENST00000507944 RAB12Q6IQ22 244 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms