RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 MELTFP08582 738 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 ELK1P19419 428 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 DTYMKP23919 212 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 SRSF7Q16629 238 aaKnown RBP eCLIP16.51■□□□□ 0.23
USP53-203ENST00000507597 HEPN1Q6WQI6 88 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 OR13D1Q8NGV5 346 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 MRPL30Q8TCC3 161 aaKnown RBP16.51■□□□□ 0.23
USP53-203ENST00000507597 ARL11Q969Q4 196 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 UPRTQ96BW1 309 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 SMR3AQ99954 134 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 SIRPDQ9H106 197 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 ZMAT3Q9HA38 289 aaKnown RBP16.51■□□□□ 0.23
USP53-203ENST00000507597 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
USP53-203ENST00000507597 CALYQ9NYX4 217 aa16.51■□□□□ 0.23
USP53-203ENST00000507597 YLPM1P49750 1951 aaKnown RBP16.51■□□□□ 0.23
USP53-203ENST00000507597 EIF4EP06730 217 aaKnown RBP16.5■□□□□ 0.23
USP53-203ENST00000507597 CCL3L1P16619 93 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 SRP14P37108 136 aaKnown RBP16.5■□□□□ 0.23
USP53-203ENST00000507597 KIR2DS4P43632 304 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 KIR2DS1Q14954 304 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 GPR157Q5UAW9 335 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 OR13A1Q8NGR1 328 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 DIRAS2Q96HU8 199 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 BEX2Q9BXY8 128 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 AUNIPQ9H7T9 357 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 EXTL2Q9UBQ6 330 aa16.5■□□□□ 0.23
USP53-203ENST00000507597 MRPS7Q9Y2R9 242 aaKnown RBP16.5■□□□□ 0.23
USP53-203ENST00000507597 CTDSP2O14595 271 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 MMP9P14780 707 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 PRSS3P35030 304 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 TAS2R20P59543 309 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 VMO1Q7Z5L0 202 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 OR52M1Q8NGK5 317 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 LINC00574Q9H8X3 128 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 IDI2-AS1Q9NZ38 188 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 KCNK7Q9Y2U2 307 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 SESN1Q9Y6P5 492 aa16.49■□□□□ 0.23
USP53-203ENST00000507597 TMEM235A6NFC5 223 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 IGHV1-8P0DP01 117 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 FAM120AOSQ5T036 256 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 ZNF880Q6PDB4 577 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 RTN4RL2Q86UN3 420 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 DYRK2Q92630 601 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 GALMQ96C23 342 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 TAF9BQ9HBM6 251 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 ZNF286AQ9HBT8 521 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.48■□□□□ 0.232e-16■■□□□ 12
USP53-203ENST00000507597 ABCA1O95477 2261 aa16.48■□□□□ 0.23
USP53-203ENST00000507597 NPIPB11E5RHQ5 1161 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 SULT1C2O00338 296 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 RGS11O94810 467 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 CGB3P0DN86 165 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 CGB7P0DN87 165 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 FPR2P25090 351 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 DLX6P56179 175 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 MRPS10P82664 201 aaKnown RBP16.47■□□□□ 0.23
USP53-203ENST00000507597 FOXB2Q5VYV0 432 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 TCF23Q7RTU1 214 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 LAX1Q8IWV1 398 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 Q8N7P7 452 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 GSX1Q9H4S2 264 aaPredicted RBP16.47■□□□□ 0.23
USP53-203ENST00000507597 SCPEP1Q9HB40 452 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 Q9N2K0 584 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 SIRT7Q9NRC8 400 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 MED13LQ71F56 2210 aa16.47■□□□□ 0.23
USP53-203ENST00000507597 TRDCB7Z8K6 153 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 FCGR3AP08637 254 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 RCC1P18754 421 aaPredicted RBP16.46■□□□□ 0.23
USP53-203ENST00000507597 UBE2E1P51965 193 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 PRRX1P54821 245 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 LGALS4P56470 323 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 HTD2P86397 168 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 C17orf58Q2M2W7 97 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 Q3ZCU0 254 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 CHRFAM7AQ494W8 412 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 STEAP3Q658P3 488 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 PYHIN1Q6K0P9 492 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 CNIH2Q6PI25 160 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 PRR18Q8N4B5 295 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 LHX4Q969G2 390 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 TBX15Q96SF7 602 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 TMEM133Q9H2Q1 129 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 IFT46Q9NQC8 304 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 NUP50Q9UKX7 468 aa16.46■□□□□ 0.23
USP53-203ENST00000507597 MEX3AA1L020 520 aaKnown RBP16.45■□□□□ 0.22
USP53-203ENST00000507597 FABP12A6NFH5 140 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 C12orf77C9JDV5 145 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 TOR1AO14656 332 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 DIRAS3O95661 229 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 HBZP02008 142 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 CTXN2P0C2S0 81 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 NFYBP25208 207 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 SSTR5P35346 364 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 HLA-DRB3P79483 266 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 HMGN3Q15651 99 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 OLFML2AQ68BL7 652 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 Q6ZS49 121 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 IZUMO1Q8IYV9 350 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 C11orf42Q8N5U0 333 aa16.45■□□□□ 0.22
USP53-203ENST00000507597 OR4A4PQ8NGN8 299 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms