RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 C10orf67Q8IYJ2 551 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 KLHL30-AS1Q8NEE0 82 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 OR52N1Q8NH53 320 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 UBALD1Q8TB05 177 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 TMEM106AQ96A25 262 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 IFT22Q9H7X7 185 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 FGF20Q9NP95 211 aaPredicted RBP9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 TMEM138Q9NPI0 162 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 IL36GQ9NZH8 169 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 DNAH3Q8TD57 4116 aa9.11□□□□□ -0.95
HMGCS1-204ENST00000507293 IGHV3-43A0A0B4J1X8 118 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 A0A1W2PP11 408 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 LINC01548A6NM66 108 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 C15orf65H3BRN8 121 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 CCRL2O00421 344 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 SDCBPO00560 298 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 GEMIN2O14893 280 aaKnown RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 WBP4O75554 376 aaKnown RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 IGHG2P01859 326 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 GAPDHP04406 335 aaKnown RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 IGHV3-43DP0DP04 118 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 ZNF93P35789 620 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 MYCNOSP40205 109 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 ETV1P50549 477 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 MPV17LQ2QL34 196 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 CCDC58Q4VC31 144 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 ATAD3CQ5T2N8 411 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 FAM53AQ6NSI3 398 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 IZUMO1Q8IYV9 350 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 STPG2Q8N412 459 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 OR13C5Q8NGS8 318 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 NEK7Q8TDX7 302 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 CCDC107Q8WV48 283 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 ARL11Q969Q4 196 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 ORAI1Q96D31 301 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 EAF1Q96JC9 268 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 S100A13Q99584 98 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 ZFP57Q9NU63 452 aa9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 SIRT4Q9Y6E7 314 aaPredicted RBP9.1□□□□□ -0.95
HMGCS1-204ENST00000507293 NCBP2LA6PVI3 153 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 GZMHP20718 246 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 BDKRB2P30411 391 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 SLC6A1P30531 599 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 GPR12P47775 334 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 EBI3Q14213 229 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 TMPRSS11AQ6ZMR5 421 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 TGIF2LXQ8IUE1 241 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 ZNF695Q8IW36 515 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 PQLC1Q8N2U9 271 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 LINC00311Q8N616 119 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 Q8N6K4 173 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 Q8N9W7 124 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 OR52M1Q8NGK5 317 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 OR2T10Q8NGZ9 312 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 SMIM19Q96E16 107 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 P2RX4Q99571 388 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 ZNF184Q99676 751 aaPredicted RBP9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 MCRIP2Q9BUT9 160 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 S100A14Q9HCY8 104 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 LIN7CQ9NUP9 197 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 GFOD1Q9NXC2 390 aa9.09□□□□□ -0.95
HMGCS1-204ENST00000507293 MAGEA13PA6NCF6 341 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 AIPO00170 330 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 AP4M1O00189 453 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 SLC31A2O15432 143 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 OGG1O15527 345 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 LALBAP00709 142 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 IGFBP3P17936 291 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 IL3RAP26951 378 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 DCKP27707 260 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 RAB25P57735 213 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 GABPB1Q06547 395 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 CD69Q07108 199 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 RIPK1Q13546 671 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 SLC22A6Q4U2R8 563 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF497Q6ZNH5 498 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 C8orf31Q8N9H6 132 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF555Q8NEP9 628 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 RTN4IP1Q8WWV3 396 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 ST6GALNAC6Q969X2 333 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 ABCG5Q9H222 651 aa9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 PAK1IP1Q9NWT1 392 aaPredicted RBP9.08□□□□□ -0.96
HMGCS1-204ENST00000507293 TRBV5-5A0A0J9YX44 114 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 IRGMA1A4Y4 181 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF736B4DX44 427 aaPredicted RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 C12orf77C9JDV5 145 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 ORC5O43913 435 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 ZNF780AO75290 641 aaPredicted RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 MT-ND4P03905 459 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 GTF2F2P13984 249 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 MYL12AP19105 171 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 PNLIPRP3Q17RR3 467 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 DEFB136Q30KP8 78 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 TEX38Q6PEX7 206 aa9.07□□□□□ -0.96
HMGCS1-204ENST00000507293 UNQ9370/PRO34162Q6UXP9 181 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 657.6 ms