RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MRGPRDQ8TDS7 321 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.35□□□□□ -1.55
VCAN-207ENST00000507162 CST11Q9H112 138 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 MED20Q9H944 212 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 PEMTQ9UBM1 199 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 NUBP2Q9Y5Y2 271 aa5.35□□□□□ -1.55
VCAN-207ENST00000507162 IGKV1-27A0A075B6S5 117 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 TRBV2A0A0J9YWF9 115 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 TMEM120BA0PK00 339 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 HSPB6O14558 160 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 DEGS1O15121 323 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 DEFB4AO15263 64 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 IL1AP01583 271 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 CSTBP04080 98 aaKnown RBP5.34□□□□□ -1.55
VCAN-207ENST00000507162 EGR2P11161 476 aaPredicted RBP5.34□□□□□ -1.55
VCAN-207ENST00000507162 KIR2DS2P43631 304 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 ACTBP60709 375 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 NDPQ00604 133 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 C5orf64Q2M2E5 130 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 C19orf54Q5BKX5 351 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 C1orf134Q5TEV5 83 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 LINC01590Q5TEZ4 76 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 ZNF660Q6AZW8 331 aaPredicted RBP5.34□□□□□ -1.55
VCAN-207ENST00000507162 SLC16A12Q6ZSM3 486 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 TMEM179BQ7Z7N9 219 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 ZDHHC13Q8IUH4 622 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 TCTEX1D1Q8N7M0 179 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 TCEANCQ8N8B7 351 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 OR5T1Q8NG75 326 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 OR2T12Q8NG77 320 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 RDH12Q96NR8 316 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 FAM103A1Q9BTL3 118 aaKnown RBP5.34□□□□□ -1.55
VCAN-207ENST00000507162 CCDC28BQ9BUN5 200 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 OR51V1Q9H2C8 321 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 SLA2Q9H6Q3 261 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 FAM206AQ9NX38 181 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 PEF1Q9UBV8 284 aaKnown RBP5.34□□□□□ -1.55
VCAN-207ENST00000507162 KIF25Q9UIL4 384 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 RNF150Q9ULK6 438 aa5.34□□□□□ -1.55
VCAN-207ENST00000507162 IGHV4-4A0A075B6R2 117 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 IGHV3-43A0A0B4J1X8 118 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 A0A0G2JLM5 398 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 ACOD1A6NK06 481 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 FCN1O00602 326 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 UBE2CO00762 179 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 GSTA4O15217 222 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 NBR2O15453 112 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 AIREO43918 545 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 SELENOFO60613 162 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 HTR3BO95264 441 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 TRBV12-3P01733 135 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 IGHV3-43DP0DP04 118 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 RPL35AP18077 110 aaKnown RBP5.33□□□□□ -1.56
VCAN-207ENST00000507162 SSTR5P35346 364 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 FUT6P51993 359 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 HCCSP53701 268 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 LINC00205P59089 165 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 CX3CL1P78423 397 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 PLGLAQ15195 96 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 MOGAT2Q3SYC2 334 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 SPIN3Q5JUX0 258 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 SLC15A3Q8IY34 581 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 LFNGQ8NES3 379 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 OR8J3Q8NGG0 315 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 OTOSQ8NHW6 89 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 UBALD1Q8TB05 177 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 GNPDA2Q8TDQ7 276 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 BORCS8Q96FH0 119 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 CLCC1Q96S66 551 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 RARRES2Q99969 163 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 NMNAT2Q9BZQ4 307 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 PARP12Q9H0J9 701 aaKnown RBP5.33□□□□□ -1.56
VCAN-207ENST00000507162 HMG20AQ9NP66 347 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 SSU72Q9NP77 194 aaKnown RBP5.33□□□□□ -1.56
VCAN-207ENST00000507162 KLHDC2Q9Y2U9 406 aa5.33□□□□□ -1.56
VCAN-207ENST00000507162 A0A0B4J203 849 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 FAM220BPB1ANY3 271 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 C11orf94C9JXX5 98 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 NPIPB11E5RHQ5 1161 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 SLC33A1O00400 549 aaPredicted RBP5.32□□□□□ -1.56
VCAN-207ENST00000507162 OR2A4O95047 310 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 SCAF4O95104 1147 aaKnown RBP5.32□□□□□ -1.56
VCAN-207ENST00000507162 GHRHP01286 108 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 IFNA10P01566 189 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 P0DMU3 169 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 FAM231AP0DMU4 169 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 FAM231CP0DMU5 169 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 IFNGR2P38484 337 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 GSSP48637 474 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 ALDH3A2P51648 485 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 RPS16P62249 146 aaKnown RBP5.32□□□□□ -1.56
VCAN-207ENST00000507162 DEFA5Q01523 94 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 UBE2V2Q15819 145 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 SAMD4BQ5PRF9 694 aaKnown RBP5.32□□□□□ -1.56
VCAN-207ENST00000507162 Q6P435 159 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 CD200R1LQ6Q8B3 271 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 NR2C2APQ86WQ0 139 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 OR14K1Q8NGZ2 314 aa5.32□□□□□ -1.56
VCAN-207ENST00000507162 C16orf45Q96MC5 204 aaPredicted RBP5.32□□□□□ -1.56
VCAN-207ENST00000507162 TSSK6Q9BXA6 273 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms