RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TM2D1Q9BX74 207 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 RAB18Q9NP72 206 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 ABCB10Q9NRK6 738 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 IDI2-AS1Q9NZ38 188 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 STEAP1Q9UHE8 339 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 AMMECR1Q9Y4X0 333 aaPredicted RBP13.54□□□□□ -0.24
SNCA-209ENST00000506244 KIAA2026Q5HYC2 2103 aa13.54□□□□□ -0.24
SNCA-209ENST00000506244 A0A1B0GUS0 222 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 VGLL3A8MV65 326 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 NPIPB11E5RHQ5 1161 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 H3BUX3 64 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 ORC5O43913 435 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 CGB3P0DN86 165 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 CGB7P0DN87 165 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 RAB3BP20337 219 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 NFYBP25208 207 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 CFPP27918 469 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 SSTR5P35346 364 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 CEACAM3P40198 252 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 PRRX1P54821 245 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 QRFPP83859 136 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 UNC119Q13432 240 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 FAM189A2Q15884 450 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 DHRS7BQ6IAN0 325 aaPredicted RBP13.53□□□□□ -0.24
SNCA-209ENST00000506244 OR10K2Q6IF99 312 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 OR4P4Q8NGL7 312 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 OR9G1Q8NH87 305 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 FAM3DQ96BQ1 224 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 AJUBAQ96IF1 538 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 FBLN5Q9UBX5 448 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 TRAPPC2LQ9UL33 140 aa13.53□□□□□ -0.24
SNCA-209ENST00000506244 SPINT2O43291 252 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 MT-ND4P03905 459 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 CHATP28329 748 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 SSX2Q16385 188 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 HLA-DRB5Q30154 266 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 TIMM50Q3ZCQ8 353 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 AWAT1Q58HT5 328 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 SIGIRRQ6IA17 410 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 BRICD5Q6PL45 260 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 SLC16A12Q6ZSM3 486 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 GAPTQ8N292 157 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 TSPAN14Q8NG11 270 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 OR4F5Q8NH21 305 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 KCNK15Q9H427 330 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 ZNF286AQ9HBT8 521 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 TXNL4BQ9NX01 149 aaKnown RBP13.52□□□□□ -0.25
SNCA-209ENST00000506244 DPM3Q9P2X0 92 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 PITPNC1Q9UKF7 332 aa13.52□□□□□ -0.25
SNCA-209ENST00000506244 DNHD1Q96M86 4753 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 ANK2Q01484 3957 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 UBE2QL1A1L167 161 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 FAM172BPA6NC97 362 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 IFITM5A6NNB3 132 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 LEUTXA8MZ59 168 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 NDUFA7O95182 113 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 IGLV1-47P01700 117 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 GDNFP39905 211 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 DYNLT3P51808 116 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 RAG2P55895 527 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 HES5Q5TA89 166 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 CCDC144NLQ6NUI1 221 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 TPRA1Q86W33 373 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 C3orf56Q8N813 242 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 OR51D1Q8NGF3 324 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 OR52M1Q8NGK5 317 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 CCDC107Q8WV48 283 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 ARL11Q969Q4 196 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 KCTD7Q96MP8 289 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 MMP28Q9H239 520 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 ZNF696Q9H7X3 374 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 PLEKHJ1Q9NW61 149 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 KCNIP1Q9NZI2 227 aa13.51□□□□□ -0.25
SNCA-209ENST00000506244 F2RL2O00254 374 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 CD36P16671 472 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 BLVRBP30043 206 aaPredicted RBP13.5□□□□□ -0.25
SNCA-209ENST00000506244 CLDN12P56749 244 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 OR56B1Q8NGI3 324 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 RFESDQ8TAC1 157 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 NICN1Q9BSH3 213 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 LPAR5Q9H1C0 372 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 BEX1Q9HBH7 125 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 HILPDAQ9Y5L2 63 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 MMP24Q9Y5R2 645 aa13.5□□□□□ -0.25
SNCA-209ENST00000506244 TRAV39A0A0B4J263 110 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 OOSP1A8MZH6 123 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 SDCBPO00560 298 aaPredicted RBP13.49□□□□□ -0.25
SNCA-209ENST00000506244 OR10A3P58181 314 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 LTC4SQ16873 150 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 Q3ZCU0 254 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 PLA1AQ53H76 456 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 BAIAP2L2Q6UXY1 529 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 MOB1BQ7L9L4 216 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 C6orf201Q7Z4U5 140 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 FAM89BQ8N5H3 189 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 DTX3Q8N9I9 347 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 OR4K15Q8NH41 348 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 SULT4A1Q9BR01 284 aa13.49□□□□□ -0.25
SNCA-209ENST00000506244 CHCHD6Q9BRQ6 235 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms