RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 SFRP4Q6FHJ7 346 aaPredicted RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 FDX2Q6P4F2 183 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 CBLN3Q6UW01 205 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ZNF813Q6ZN06 617 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ETV3LQ6ZN32 361 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SLC16A9Q7RTY1 509 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SZRD1Q7Z422 152 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 NKAIN4Q8IVV8 208 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 C15orf54Q8N8G6 183 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ZIC4Q8N9L1 334 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 PNLDC1Q8NA58 520 aaKnown RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 INO80EQ8NBZ0 244 aaPredicted RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 BEND2Q8NDZ0 799 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 BBS1Q8NFJ9 593 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 THAP6Q8TBB0 222 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 PHOSPHO1Q8TCT1 267 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 STK35Q8TDR2 534 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 TMEM255BQ8WV15 326 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SFT2D1Q8WV19 159 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 LIPHQ8WWY8 451 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ASB17Q8WXJ9 295 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 HOXB13Q92826 284 aaPredicted RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 FOXRED1Q96CU9 486 aaPredicted RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ZNF75AQ96N20 296 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SCGB3A2Q96PL1 93 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ZNF385AQ96PM9 386 aaKnown RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 PHB2Q99623 299 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 NKX3-1Q99801 234 aaPredicted RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 PRSS27Q9BQR3 290 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ST6GALNAC5Q9BVH7 336 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SF3B5Q9BWJ5 86 aaKnown RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 LINC00470Q9BZP3 86 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 QRSL1Q9H0R6 528 aaKnown RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SAV1Q9H4B6 383 aaPredicted RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SMDT1Q9H4I9 107 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 AUNIPQ9H7T9 357 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 EXOSC3Q9NQT5 275 aaKnown RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SMCO4Q9NRQ5 59 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 CKLFQ9UBR5 152 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 SHPKQ9UHJ6 478 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 ZDHHC8Q9ULC8 765 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 C19orf53Q9UNZ5 99 aaPredicted RBP3.4□□□□□ -1.87
CPNE4-204ENST00000505331 VPS13DQ5THJ4 4388 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 HMCN2Q8NDA2 5059 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 FAT2Q9NYQ8 4349 aa3.4□□□□□ -1.87
CPNE4-204ENST00000505331 TRBV5-7A0A0A0MS05 114 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 A0A0B4J2E0 115 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 TEX13DA0A0J9YY54 714 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-204ENST00000505331 A0A1B0GX12 115 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 TVP23AA6NH52 213 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 C1orf196B1AJZ1 125 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 E9PI62 339 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 TMEM178BH3BS89 294 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 SLC17A2O00624 439 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 UBE2CO00762 179 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 GOSR2O14653 212 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 NPFFO15130 113 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 UPK3AO75631 287 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 GLCEO94923 617 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 SPDEFO95238 335 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 LYPD3O95274 346 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 SLC2A10O95528 541 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 FSTL3O95633 263 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 CYB5AP00167 134 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 HLA-HP01893 362 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 MT-ND4LP03901 98 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 CD74P04233 296 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 RLN1P04808 185 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 CD2P06729 351 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ANXA2P07355 339 aaKnown RBP3.39□□□□□ -1.87
CPNE4-204ENST00000505331 OR4E1P0C645 316 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 SLC2A1P11166 492 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 TNFRSF1AP19438 455 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ANXA7P20073 488 aaKnown RBP3.39□□□□□ -1.87
CPNE4-204ENST00000505331 RAB6AP20340 208 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 CDK2P24941 298 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 MYCNOSP40205 109 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 NPY4RP50391 375 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 PRKAG1P54619 331 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 FXYD6P3P58550 94 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 POLR2GP62487 172 aaKnown RBP eCLIP3.39□□□□□ -1.87
CPNE4-204ENST00000505331 SLC35A1P78382 337 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 BLOC1S1P78537 153 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 TNFAIP6P98066 277 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-204ENST00000505331 PJVKQ0ZLH3 352 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ALKBH1Q13686 389 aaKnown RBP3.39□□□□□ -1.87
CPNE4-204ENST00000505331 INSL4Q14641 139 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 OR1Q1Q15612 314 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 LY6EQ16553 131 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 C4orf46Q504U0 113 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 LBHQ53QV2 105 aaPredicted RBP3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ACTBL2Q562R1 376 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 KHDC1LQ5JSQ8 128 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ZNF684Q5T5D7 378 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 FAM27D1Q5T7N8 215 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ASPHD1Q5U4P2 390 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 STEAP1BQ6NZ63 245 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ULK3Q6PHR2 472 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 ZNF836Q6ZNA1 936 aa3.39□□□□□ -1.87
CPNE4-204ENST00000505331 PRSS45Q7RTY3 260 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms