RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	FAM90A9P	A6NNJ1	464 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	FAM90A12P	A8MX19	464 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	FAM90A5P	A8MXJ8	464 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066		E9PI62	339 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	AIP	O00170	330 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	ORC5	O43913	435 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	CDRT1	O95170	752 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	BAG2	O95816	211 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	FAM90A15P	P0C7V4	464 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	FAM90A13P	P0C7W8	464 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	FAM90A14P	P0C7W9	464 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	FAM90A24P	P0C7X0	464 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	SSTR5	P35346	364 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	PNLIPRP3	Q17RR3	467 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	SLC22A6	Q4U2R8	563 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	NHLRC3	Q5JS37	347 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	TRAT1	Q6PIZ9	186 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	OR2W3	Q7Z3T1	314 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	TGIF2LX	Q8IUE1	241 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	MRPL41	Q8IXM3	137 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	LINC00482	Q8N8I6	264 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	OR8H1	Q8NGG4	311 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	IFT22	Q9H7X7	185 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	KCNIP1	Q9NZI2	227 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	AASS	Q9UDR5	926 aa		12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.99	□□□□□ -0.33
DDR1-256	ENST00000505066	PLXNB1	O43157	2135 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066		A0A1W2PPI3	338 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	MOS	P00540	346 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	AMY1A	P04745	511 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	AMY2A	P04746	511 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	OR5H8	P0DN80	308 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	CGB3	P0DN86	165 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	CGB7	P0DN87	165 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	VDAC1	P21796	283 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	GTF2A1	P52655	376 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	ASCL4	Q6XD76	172 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	RNF144B	Q7Z419	303 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	JAGN1	Q8N5M9	183 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	SETD9	Q8NE22	299 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	PLPPR1	Q8TBJ4	325 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	CCDC107	Q8WV48	283 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	THRSP	Q92748	146 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	MRPS24	Q96EL2	167 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	NOL4L	Q96MY1	436 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	RDH12	Q96NR8	316 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	LIN7C	Q9NUP9	197 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	MRPS18A	Q9NVS2	196 aa	Known RBP	12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	BABAM2	Q9NXR7	383 aa		12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	SIRT4	Q9Y6E7	314 aa	Predicted RBP	12.98	□□□□□ -0.33
DDR1-256	ENST00000505066	IGHV1-3	A0A0C4DH29	117 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066		H3BNX3	289 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	GEMIN2	O14893	280 aa	Known RBP	12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	RAMP3	O60896	148 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	IGHG2	P01859	326 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	GABRB1	P18505	474 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	HOXD3	P31249	432 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	REG1B	P48304	166 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	THBS3	P49746	956 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	TAS2R43	P59537	309 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	DGCR2	P98153	550 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066		Q3ZCU0	254 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	C10orf99	Q6UWK7	81 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	C8orf86	Q6ZUL3	223 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	PQLC1	Q8N2U9	271 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	STPG2	Q8N412	459 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	C8orf31	Q8N9H6	132 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066		Q8NFD4	153 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	OR8U1	Q8NH10	309 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	SMIM19	Q96E16	107 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	ZNF184	Q99676	751 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	FGF20	Q9NP95	211 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	SMPD3	Q9NY59	655 aa	Predicted RBP	12.97	□□□□□ -0.33
DDR1-256	ENST00000505066	ETAA1	Q9NY74	926 aa		12.97	□□□□□ -0.33
DDR1-256	ENST00000505066		A0A1W2PPE3	182 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066		K7EIL1	84 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	CD1B	P29016	333 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066		Q499Y3	187 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	YIF1B	Q5BJH7	314 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	TTC23	Q5W5X9	447 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	ZNF529	Q6P280	563 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	TMEM65	Q6PI78	240 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	IZUMO1	Q8IYV9	350 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	OR5M8	Q8NGP6	311 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	EAF1	Q96JC9	268 aa	Predicted RBP	12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	S100A14	Q9HCY8	104 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	GFOD1	Q9NXC2	390 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	LINC00527	Q9UJ94	153 aa		12.96	□□□□□ -0.33
DDR1-256	ENST00000505066	IGHV3-72	A0A0B4J1Y9	119 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	TRAV39	A0A0B4J263	110 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	CA11	O75493	328 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	LIMS3	P0CW19	117 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	LIMS4	P0CW20	117 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	SOX6	P35712	828 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	GPR12	P47775	334 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	GPR50	Q13585	617 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	PRR18	Q8N4B5	295 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	LINC00311	Q8N616	119 aa		12.95	□□□□□ -0.34
DDR1-256	ENST00000505066	CYGB	Q8WWM9	190 aa		12.95	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms