RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 DYRK2Q92630 601 aa14.76□□□□□ -0.05
SQSTM1-209ENST00000504627 NICN1Q9BSH3 213 aa14.76□□□□□ -0.05
SQSTM1-209ENST00000504627 DPAGT1Q9H3H5 408 aa14.76□□□□□ -0.05
SQSTM1-209ENST00000504627 ST3GAL6Q9Y274 331 aa14.76□□□□□ -0.05
SQSTM1-209ENST00000504627 MMP24Q9Y5R2 645 aa14.76□□□□□ -0.05
SQSTM1-209ENST00000504627 A0A1W2PRD5 423 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 A0A1W2PRF3 423 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 A0A1W2PRM7 423 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 H3BUI4 141 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 J3QRK9 145 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 NXPH2O95156 264 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 IGHV4-59P01825 116 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 PSG2P11465 335 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 PRKACAP17612 351 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 IER3P46695 156 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 PRB3Q04118 309 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 SMIM21Q3B7S5 101 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 PIGYQ3MUY2 71 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 MOGAT2Q3SYC2 334 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 ZNRF1Q8ND25 227 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 RAB3CQ96E17 227 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 ZNF488Q96MN9 340 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 SDHCQ99643 169 aaPredicted RBP14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 RASL12Q9NYN1 266 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 C1RLQ9NZP8 487 aa14.75□□□□□ -0.05
SQSTM1-209ENST00000504627 IGKV1D-17A0A075B6S4 117 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 TRAV18A0A075B6X5 111 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 BTBD17A6NE02 478 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 F8VVB4 439 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 F8VWA3 439 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 HLA-DQB1P01920 261 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 GSTP1P09211 210 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 FBP1P09467 338 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 HIST1H1DP16402 221 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 RPL15P61313 204 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 MADCAM1Q13477 382 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 SPIN3Q5JUX0 258 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 OLFML2AQ68BL7 652 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 LDLRAD3Q86YD5 345 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 SNX29P2Q8IUI4 249 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 Q8N7P7 452 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 SMIM4Q8WVI0 70 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 ABHD1Q96SE0 405 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 AUNIPQ9H7T9 357 aa14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 MRPS7Q9Y2R9 242 aaKnown RBP14.74□□□□□ -0.05
SQSTM1-209ENST00000504627 TRRAPQ9Y4A5 3859 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 RNASEK-C17orf49H0YIS7 233 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 GABARAPH6UMI1 98 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 M0R1W7 72 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 MFNGO00587 321 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 GEMIN2O14893 280 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 NPFFO15130 113 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 GSTZ1O43708 216 aaPredicted RBP14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 GPR137BO60478 399 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 UPK1BO75841 260 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 NDUFA7O95182 113 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 GABRR1P24046 479 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 DLX1P56177 255 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 KLRD1Q13241 179 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 TAF9Q16594 264 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 C1orf122Q6ZSJ8 110 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 FAM185AQ8N0U4 392 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 Q8N402 240 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 DTX3Q8N9I9 347 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 CHST4Q8NCG5 386 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 IFT22Q9H7X7 185 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 METTL8Q9H825 291 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 SCPEP1Q9HB40 452 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 SPACA1Q9HBV2 294 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 RCC2Q9P258 522 aaKnown RBP14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 HSF4Q9ULV5 492 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 MAB21L2Q9Y586 359 aa14.73□□□□□ -0.05
SQSTM1-209ENST00000504627 MEIOCA2RUB1 952 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 CLPSL1A2RUU4 121 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 RFPL4AA6NLU0 287 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 SERPINE3A8MV23 424 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 RFPL4AL1F8VTS6 287 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 SULT1C2O00338 296 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 SOCS1O15524 211 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 PDCD6O75340 191 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 CA11O75493 328 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 CHATP28329 748 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 BLVRBP30043 206 aaPredicted RBP14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 RELBQ01201 579 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 ZNF146Q15072 292 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 PNLIPRP3Q17RR3 467 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 ZNF260Q3ZCT1 412 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 NCR3LG1Q68D85 454 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 ACP7Q6ZNF0 438 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 Q6ZTK2 550 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 BATF2Q8N1L9 274 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 NEDD4LQ96PU5 975 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 ZNF222Q9UK12 451 aa14.72□□□□□ -0.05
SQSTM1-209ENST00000504627 TRBV23-1A0A0A0MS06 115 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 TMEM235A6NFC5 223 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 OR7C1O76099 320 aaPredicted RBP14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 IL7P13232 177 aa14.71□□□□□ -0.05
SQSTM1-209ENST00000504627 UBE2E1P51965 193 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms