RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 HES4Q9HCC6 221 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 FAM215AQ9Y5M1 114 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 TNFSF12O43508 249 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 TIMM8AO60220 97 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-204ENST00000503492 ACAA1P09110 424 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-204ENST00000503492 CEBPDP49716 269 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-204ENST00000503492 FAM209AQ5JX71 171 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 CLEC9AQ6UXN8 241 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 BSCL2Q96G97 398 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-204ENST00000503492 SMIM3Q9BZL3 60 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 ERRFI1Q9UJM3 462 aaPredicted RBP19.01■□□□□ 0.63
PCDH1-204ENST00000503492 SLC25A15Q9Y619 301 aa19.01■□□□□ 0.63
PCDH1-204ENST00000503492 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19■□□□□ 0.63
PCDH1-204ENST00000503492 ST8SIA3O43173 380 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 PGLYRP1O75594 196 aaPredicted RBP19■□□□□ 0.63
PCDH1-204ENST00000503492 CDS2O95674 445 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 UCP1P25874 307 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 HOXA4Q00056 320 aaPredicted RBP19■□□□□ 0.63
PCDH1-204ENST00000503492 MOB1BQ7L9L4 216 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 CMTM1Q8IZ96 169 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 SUN5Q8TC36 379 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 MARC2Q969Z3 335 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 CXXC4Q9H2H0 198 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 ZFP57Q9NU63 452 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 WNT9BO14905 357 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 TUBG1P23258 451 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 EIF5AP63241 154 aaKnown RBP19■□□□□ 0.63
PCDH1-204ENST00000503492 DMBX1Q8NFW5 382 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 PIGMQ9H3S5 423 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 TUBG2Q9NRH3 451 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 OR14J1Q9UGF5 321 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 TRAPPC2LQ9UL33 140 aa19■□□□□ 0.63
PCDH1-204ENST00000503492 RCL1Q9Y2P8 373 aaKnown RBP19■□□□□ 0.63
PCDH1-204ENST00000503492 HAND1O96004 215 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 ZNF718Q3SXZ3 478 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 PRAMEF6Q5VXH4 476 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 MSL2Q9HCI7 577 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 POMT1Q9Y6A1 747 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 NPIPB11E5RHQ5 1161 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 GAPDHP04406 335 aaKnown RBP18.99■□□□□ 0.63
PCDH1-204ENST00000503492 PRR18Q8N4B5 295 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 SNIP1Q8TAD8 396 aaKnown RBP18.99■□□□□ 0.63
PCDH1-204ENST00000503492 UBALD1Q8TB05 177 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 LRFN3Q9BTN0 628 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 COQ3Q9NZJ6 369 aa18.99■□□□□ 0.63
PCDH1-204ENST00000503492 ZNF474Q6S9Z5 364 aaPredicted RBP18.98■□□□□ 0.63
PCDH1-204ENST00000503492 MBNL3Q9NUK0 354 aaKnown RBP18.98■□□□□ 0.63
PCDH1-204ENST00000503492 TAAR3PQ9P1P4 343 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 WIPI2Q9Y4P8 454 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 MUC6Q6W4X9 2439 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 C1QTNF9BB2RNN3 333 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 H0Y980 276 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 GPR137BO60478 399 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 PSPNO60542 156 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 M6PRP20645 277 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 GCH1P30793 250 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 P2RY1P47900 373 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 MBNL2Q5VZF2 373 aaKnown RBP18.98■□□□□ 0.63
PCDH1-204ENST00000503492 FAM169BQ8N8A8 192 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 BPIFCQ8NFQ6 507 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 OR10V1Q8NGI7 309 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 TLNRD1Q9H1K6 362 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 CEP250Q9BV73 2442 aa18.98■□□□□ 0.63
PCDH1-204ENST00000503492 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.97■□□□□ 0.63
PCDH1-204ENST00000503492 JTBO76095 146 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 TESK1Q15569 626 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 MST1LQ2TV78 715 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 C1QTNF12Q5T7M4 302 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 C1orf185Q5T7R7 199 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 MS4A7Q9GZW8 240 aaPredicted RBP18.97■□□□□ 0.63
PCDH1-204ENST00000503492 LPAR3Q9UBY5 353 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 GVINP1Q7Z2Y8 2422 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 A6NLC8 198 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 ZNF705EA8MWA4 302 aaPredicted RBP18.97■□□□□ 0.63
PCDH1-204ENST00000503492 ADAM20O43506 726 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 HOXD4P09016 255 aaPredicted RBP18.97■□□□□ 0.63
PCDH1-204ENST00000503492 F2RP25116 425 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 NMSQ5H8A3 153 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 GPR157Q5UAW9 335 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 FIP1L1Q6UN15 594 aaKnown RBP18.97■□□□□ 0.63
PCDH1-204ENST00000503492 WDR82Q6UXN9 313 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 OR5D13Q8NGL4 314 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 C11orf1Q9H5F2 150 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 UFSP2Q9NUQ7 469 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 PLA2G2EQ9NZK7 142 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 WASF3Q9UPY6 502 aa18.97■□□□□ 0.63
PCDH1-204ENST00000503492 HEATR1Q9H583 2144 aaKnown RBP18.96■□□□□ 0.63
PCDH1-204ENST00000503492 RAB19A4D1S5 217 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 SIGLEC5O15389 551 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 WFDC1Q9HC57 220 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 AKAP13Q12802 2813 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 DUXBA0A1W2PPF3 345 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 IGLV2-14P01704 120 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 CRYABP02511 175 aaKnown RBP18.96■□□□□ 0.63
PCDH1-204ENST00000503492 LMO1P25800 156 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 HMGN3Q15651 99 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 EIF5AL1Q6IS14 154 aaKnown RBP18.96■□□□□ 0.63
PCDH1-204ENST00000503492 SPIN2AQ99865 258 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 SPIN2BQ9BPZ2 258 aa18.96■□□□□ 0.63
PCDH1-204ENST00000503492 FBXO24O75426 580 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms