RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 HIST1H2BDP58876 126 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 HIST1H2BCP62807 126 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 RUNX1Q01196 453 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 HIST2H2BEQ16778 126 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 KRTAP27-1Q3LI81 207 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.07□□□□□ -0.16
COL6A1-206ENST00000498614 GFI1BQ5VTD9 330 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 OR10D4PQ8NGN7 298 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 HIST1H2BHQ93079 126 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 GPHA2Q96T91 129 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 HIST1H2BNQ99877 126 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 HIST1H2BMQ99879 126 aa14.07□□□□□ -0.16
COL6A1-206ENST00000498614 hCG_38984A0A1B0GV85 526 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 BTBD17A6NE02 478 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF587BE7ETH6 402 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 FTH1P19P0C7X4 201 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 GPX4P36969 197 aaPredicted RBP14.06□□□□□ -0.16
COL6A1-206ENST00000498614 SSPNQ14714 243 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 PLCXD3Q63HM9 321 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 TMEM42Q69YG0 159 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 TMEM217Q8N7C4 229 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 TMEM222Q9H0R3 208 aa14.06□□□□□ -0.16
COL6A1-206ENST00000498614 TMEM50AO95807 157 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 PDZD11Q5EBL8 140 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 C9orf135Q5VTT2 229 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 TVP23CQ96ET8 276 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 LYRM2Q9NU23 88 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-206ENST00000498614 UBE2J1Q9Y385 318 aaPredicted RBP14.05□□□□□ -0.16
COL6A1-206ENST00000498614 WSB1Q9Y6I7 421 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 CYB5BO43169 146 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 ADAM20O43506 726 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 CYTIPO60759 359 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 PDCD6O75340 191 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 NXPH3O95157 252 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 SERPINA7P05543 415 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 JMJD7P0C870 316 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 EDN3P14138 238 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 GNRHRP30968 328 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 GFRA1P56159 465 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 SRYQ05066 204 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 MALLQ13021 153 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF506Q5JVG8 444 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 TBC1D26Q86UD7 250 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF695Q8IW36 515 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF100Q8IYN0 542 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 PSMF1Q92530 271 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 THOC3Q96J01 351 aaKnown RBP14.05□□□□□ -0.16
COL6A1-206ENST00000498614 OPA3Q9H6K4 179 aa14.05□□□□□ -0.16
COL6A1-206ENST00000498614 HSPA12AO43301 675 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 TRGC2P03986 189 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 SOD3P08294 240 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 PCBD1P61457 104 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 VAMP2P63027 116 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 RIPPLY2Q5TAB7 128 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 P4HA3Q7Z4N8 544 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 SELENOHQ8IZQ5 122 aaKnown RBP14.04□□□□□ -0.16
COL6A1-206ENST00000498614 CPNE4Q96A23 557 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-206ENST00000498614 STRADBQ9C0K7 418 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 SLC25A31Q9H0C2 315 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 PRDM13Q9H4Q3 707 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF442Q9H7R0 627 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 LRFN1Q9P244 771 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF732B4DXR9 585 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 HSPB1P04792 205 aaKnown RBP14.04□□□□□ -0.16
COL6A1-206ENST00000498614 GLIPR1P48060 266 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 DEFA6Q01524 100 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 FOXO1Q12778 655 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 DAZAP2Q15038 168 aaPredicted RBP14.04□□□□□ -0.16
COL6A1-206ENST00000498614 CPEB3Q8NE35 698 aaKnown RBP14.04□□□□□ -0.16
COL6A1-206ENST00000498614 CLDND2Q8NHS1 167 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 TMEM56Q96MV1 263 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 NIPSNAP3BQ9BS92 247 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 GPR61Q9BZJ8 451 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 SLC7A10Q9NS82 523 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 TMEM56-RWDD3S4R434 201 aa14.04□□□□□ -0.16
COL6A1-206ENST00000498614 SEC14L6B5MCN3 397 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 CELA3AP09093 270 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 MMP7P09237 267 aaPredicted RBP14.03□□□□□ -0.16
COL6A1-206ENST00000498614 FUT6P51993 359 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 SRPXP78539 464 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 SPIN3Q5JUX0 258 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 DPPA2Q7Z7J5 298 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 CALHM1Q8IU99 346 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 HIST3H2BBQ8N257 126 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 RHOVQ96L33 236 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 HES7Q9BYE0 225 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 CALHM2Q9HA72 323 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 CCNOP22674 350 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF154Q13106 437 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 OR8B8Q15620 311 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 TMEM211Q6ICI0 200 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 SIRT7Q9NRC8 400 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF391Q9UJN7 358 aa14.03□□□□□ -0.16
COL6A1-206ENST00000498614 A0A096LPE4 126 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 ZNF816-ZNF321PA0A0X1KG74 233 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 A0A1W2PPZ6 126 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 CXorf65A6NEN9 183 aa14.02□□□□□ -0.16
COL6A1-206ENST00000498614 OR7C1O76099 320 aaPredicted RBP14.02□□□□□ -0.16
COL6A1-206ENST00000498614 RBM11P57052 281 aaKnown RBP14.02□□□□□ -0.16
COL6A1-206ENST00000498614 RPL23AP62750 156 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms