RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 ZP1P60852 638 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 CXorf66Q5JRM2 361 aaPredicted RBP12.56□□□□□ -0.4
MUC1-220ENST00000498431 FAM220AQ7Z4H9 259 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 Q8N6K4 173 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 RNF152Q8N8N0 203 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 ZNF565Q8N9K5 539 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 Q8N9W7 124 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 PLPPR1Q8TBJ4 325 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 HAVCR2Q8TDQ0 301 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 APH1BQ8WW43 257 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 ABCG5Q9H222 651 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 MYRFQ9Y2G1 1151 aa12.56□□□□□ -0.4
MUC1-220ENST00000498431 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
MUC1-220ENST00000498431 IGHV1-3A0A0C4DH29 117 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 WBP4O75554 376 aaKnown RBP12.55□□□□□ -0.4
MUC1-220ENST00000498431 MYF6P23409 242 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 ATP6V1E1P36543 226 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 CFHR3Q02985 330 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 ZNF816Q0VGE8 651 aaPredicted RBP12.55□□□□□ -0.4
MUC1-220ENST00000498431 FOXE3Q13461 319 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 ZNF260Q3ZCT1 412 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 PAN3Q58A45 887 aaKnown RBP12.55□□□□□ -0.4
MUC1-220ENST00000498431 RSBN1Q5VWQ0 802 aaPredicted RBP12.55□□□□□ -0.4
MUC1-220ENST00000498431 MOB3BQ86TA1 216 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 TGIF2LXQ8IUE1 241 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 SBSPONQ8IVN8 264 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 OR13C3Q8NGS6 347 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 OR10X1Q8NGY0 326 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 CNIH3Q8TBE1 160 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 FBLIM1Q8WUP2 373 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 RCHY1Q96PM5 261 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 NR1H4Q96RI1 486 aaPredicted RBP12.55□□□□□ -0.4
MUC1-220ENST00000498431 RHOFQ9HBH0 211 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 LIN7CQ9NUP9 197 aaKnown RBP12.55□□□□□ -0.4
MUC1-220ENST00000498431 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
MUC1-220ENST00000498431 RPL36Q9Y3U8 105 aaKnown RBP12.55□□□□□ -0.4
MUC1-220ENST00000498431 TMEM225BP0DP42 221 aa12.54□□□□□ -0.4
MUC1-220ENST00000498431 C21orf33P30042 268 aaPredicted RBP12.54□□□□□ -0.4
MUC1-220ENST00000498431 FHL3Q13643 280 aa12.54□□□□□ -0.4
MUC1-220ENST00000498431 FAM53AQ6NSI3 398 aaPredicted RBP12.54□□□□□ -0.4
MUC1-220ENST00000498431 FDX2Q6P4F2 183 aa12.54□□□□□ -0.4
MUC1-220ENST00000498431 CNBD2Q96M20 576 aa12.54□□□□□ -0.4
MUC1-220ENST00000498431 HSPB9Q9BQS6 159 aa12.54□□□□□ -0.4
MUC1-220ENST00000498431 PLSCR3Q9NRY6 295 aa12.54□□□□□ -0.4
MUC1-220ENST00000498431 CCRL2O00421 344 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 DENRO43583 198 aaKnown RBP12.53□□□□□ -0.4
MUC1-220ENST00000498431 LY86O95711 162 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 ELANEP08246 267 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 MTNR1BP49286 362 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 KISS1Q15726 138 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
MUC1-220ENST00000498431 IZUMO1Q8IYV9 350 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 Q8NFD4 153 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 C4orf3Q8WVX3 66 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 RNFT2Q96EX2 444 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 NCOR1P1Q9H4R4 102 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 SMAD5-AS1Q9Y6J3 95 aa12.53□□□□□ -0.4
MUC1-220ENST00000498431 SORL1Q92673 2214 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 OR4C45A6NMZ5 311 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 ZNF736B4DX44 427 aaPredicted RBP12.52□□□□□ -0.41
MUC1-220ENST00000498431 IGHG4P01861 327 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 GAPDHP04406 335 aaKnown RBP12.52□□□□□ -0.41
MUC1-220ENST00000498431 HCKP08631 526 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 HTR1AP08908 422 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 DBTP11182 482 aaKnown RBP12.52□□□□□ -0.41
MUC1-220ENST00000498431 PIGYQ3MUY2 71 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 C6orf141Q5SZD1 244 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 ASPHD1Q5U4P2 390 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 TMEM104Q8NE00 496 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 OR11H1Q8NG94 326 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 OR10K1Q8NGX5 313 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 OR2T10Q8NGZ9 312 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 UBALD1Q8TB05 177 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 GON7Q9BXV9 100 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 BARHL1Q9BZE3 327 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 AMBNQ9NP70 447 aa12.52□□□□□ -0.41
MUC1-220ENST00000498431 MRPS18AQ9NVS2 196 aaKnown RBP12.52□□□□□ -0.41
MUC1-220ENST00000498431 IRGMA1A4Y4 181 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 J3QRE1 110 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 PSMB8P28062 276 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 CCR9P51686 369 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 PAX5Q02548 391 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 RAB40BQ12829 278 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 ELP2Q6IA86 826 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 LAIR2Q6ISS4 152 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 SLC16A12Q6ZSM3 486 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 OVCH2Q7RTZ1 564 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 BPIFB6Q8NFQ5 453 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 OR10A7Q8NGE5 316 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 LGALS12Q96DT0 336 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 PELI1Q96FA3 418 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 S1PR3Q99500 378 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 PLCXD1Q9NUJ7 323 aa12.51□□□□□ -0.41
MUC1-220ENST00000498431 EXOGQ9Y2C4 368 aaKnown RBP12.51□□□□□ -0.41
MUC1-220ENST00000498431 HYDINQ4G0P3 5121 aa12.5□□□□□ -0.41
MUC1-220ENST00000498431 LCE6AA0A183 80 aa12.5□□□□□ -0.41
MUC1-220ENST00000498431 J3QLW9 94 aa12.5□□□□□ -0.41
MUC1-220ENST00000498431 SULT1B1O43704 296 aa12.5□□□□□ -0.41
MUC1-220ENST00000498431 FADS2O95864 444 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms