RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 A8MZ25 164 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 B5MCH6 92 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 H3BVH4 76 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 K7ENP7 123 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 FOXE1O00358 373 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZBTB5O15062 677 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PFDN6O15212 129 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TNFSF14O43557 240 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ARL6IP5O75915 188 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 NAPSAO96009 420 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PPYP01298 95 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 TMIGD3P0DMS9 266 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 HOXA9P31269 272 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GYG1P46976 350 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GALR1P47211 349 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF134P52741 427 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GFRA1P56159 465 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 FXYD6P3P58550 94 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 DSCR9P59020 149 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GNB1P62873 340 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 EIF5AP63241 154 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 TMEM95Q3KNT9 176 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MPV17L2Q567V2 206 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MIA3Q5JRA6 1907 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 FAM219BQ5XKK7 198 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 INO80CQ6PI98 192 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 HAGHLQ6PII5 290 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 TMIGD1Q6UXZ0 262 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 GCNT7Q6ZNI0 430 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 SDIM1Q6ZPB5 146 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 Q6ZVL8 140 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 LINC00346Q8IVM7 164 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 C11orf42Q8N5U0 333 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZFP62Q8NB50 900 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 DNAJA4Q8WW22 397 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 OR1E3Q8WZA6 343 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 ZNF799Q96GE5 643 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 OR5B2Q96R09 309 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 DPY30Q9C005 99 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 CST11Q9H112 138 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 MRPS30Q9NP92 439 aaKnown RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 FANCIQ9NVI1 1328 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 EMCNQ9ULC0 261 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PLAGL1Q9UM63 463 aa1.16□□□□□ -2.22
XRN1-214ENST00000498077 PRG3Q9Y2Y8 225 aaPredicted RBP1.16□□□□□ -2.22
XRN1-214ENST00000498077 TRPM6Q9BX84 2022 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 EMSYQ7Z589 1322 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 TRAV22A0A0B4J277 110 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 LCE6AA0A183 80 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 FABP12A6NFH5 140 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 FBLL1A6NHQ2 334 aaKnown RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 USP27XA6NNY8 438 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 TISP43B9A030 160 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 PIRO00625 290 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 AGPAT2O15120 278 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 HOXC11O43248 304 aaPredicted RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 CHST1O43916 411 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 FCMRO60667 390 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 PITX3O75364 302 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 OR2A4O95047 310 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 CNOT4O95628 575 aaKnown RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 TRGC2P03986 189 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A6P12236 298 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 NQO1P15559 274 aaKnown RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 CD80P33681 288 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 RPL15P61313 204 aaKnown RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 RAB11AP62491 216 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 MLF2Q15773 248 aaPredicted RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 HSD17B12Q53GQ0 312 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 TSPO2Q5TGU0 170 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 OR2T2Q6IF00 324 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 FAM122CQ6P4D5 195 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 C16orf87Q6PH81 154 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 SATL1Q86VE3 508 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 C1orf174Q8IYL3 243 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 CIARTQ8N365 385 aaPredicted RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 CHCHD4Q8N4Q1 142 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 NTN5Q8WTR8 489 aaPredicted RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 SLC13A3Q8WWT9 602 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 ST8SIA1Q92185 356 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 MRPL48Q96GC5 212 aaKnown RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 DERL3Q96Q80 235 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 OR2A7Q96R45 310 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 RASL10BQ96S79 203 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 ATOH8Q96SQ7 321 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 SIRPDQ9H106 197 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 SLC25A51Q9H1U9 297 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 PPP1R3EQ9H7J1 279 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 METTL8Q9H825 291 aaKnown RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 PPP4R1LQ9P1A2 415 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 FBXL7Q9UJT9 491 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 EPDR1Q9UM22 224 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 PACSIN2Q9UNF0 486 aaPredicted RBP1.15□□□□□ -2.22
XRN1-214ENST00000498077 PARP14Q460N5 1801 aa1.15□□□□□ -2.22
XRN1-214ENST00000498077 PTPRCP08575 1304 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 KLF18A0A0U1RQI7 1052 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 J3QR89 54 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAPDHSO14556 408 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 ACOT8O14734 319 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 AP5Z1O43299 807 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms