RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 KCNIP1Q9NZI2 227 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 ZNF230Q9UIE0 474 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-227ENST00000498056 KCNS2Q9ULS6 477 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 INSIG2Q9Y5U4 225 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 V9GYH0 126 aa11.17□□□□□ -0.62
CPNE1-227ENST00000498056 TLN2Q9Y4G6 2542 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 MEIOCA2RUB1 952 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 FAM172BPA6NC97 362 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 LPLP06858 475 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 ZNF728P0DKX0 622 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 OMGP23515 440 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 DTYMKP23919 212 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 PRSS3P35030 304 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 PAX2Q02962 417 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 KRTAP1-1Q07627 177 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 PYHIN1Q6K0P9 492 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 FAHD2BQ6P2I3 314 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-227ENST00000498056 CCDC190Q86UF4 302 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 KIR3DL3Q8N743 410 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 ZNF565Q8N9K5 539 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 FAHD2AQ96GK7 314 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 NCOR1P1Q9H4R4 102 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 ZNF286AQ9HBT8 521 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 Q9N2K0 584 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 SIRT7Q9NRC8 400 aa11.16□□□□□ -0.62
CPNE1-227ENST00000498056 MBNL3Q9NUK0 354 aaKnown RBP11.16□□□□□ -0.62
CPNE1-227ENST00000498056 F8P00451 2351 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 TRBV6-6A0A0A6YYG2 114 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 KIR2DS1A0A191URI9 304 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 hCG_1809904A0A1W2PP81 198 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 A0A1W2PPE2 198 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 A0A1W2PR64 198 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 A0A1W2PRV1 198 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 M0R1W7 72 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 SPINT2O43291 252 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 CD5LO43866 347 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 TOX4O94842 621 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 HLA-DQB1P01920 261 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 MELTFP08582 738 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 GATA3P23771 443 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 NFYBP25208 207 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 DLX1P56177 255 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 DGCR2P98153 550 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 PRB3Q04118 309 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-227ENST00000498056 HMGN3Q15651 99 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 PYDC2Q56P42 97 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 VMO1Q7Z5L0 202 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 OR1L1Q8NH94 360 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 RFESDQ8TAC1 157 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 ARL11Q969Q4 196 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 SMR3AQ99954 134 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 ST6GALNAC5Q9BVH7 336 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 TMUB1Q9BVT8 246 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 TAF9BQ9HBM6 251 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 RAB9BQ9NP90 201 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 TAS2R3Q9NYW6 316 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 RABL2AQ9UBK7 228 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-227ENST00000498056 MGAT4AQ9UM21 535 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 RABL2BQ9UNT1 228 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 KPTNQ9Y664 436 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 AUP1Q9Y679 476 aa11.15□□□□□ -0.62
CPNE1-227ENST00000498056 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 IGHV3-43A0A0B4J1X8 118 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 TRAV40A0A0B4J280 105 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 KBTBD11-OT1A0A1B0GTJ5 212 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 HBZP02008 142 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 IGHV3-43DP0DP04 118 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 COX7A1P24310 79 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 KIR2DS4P43632 304 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 CBX5P45973 191 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 DLX6P56179 175 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 ARPC4P59998 168 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 ERVFRD-1P60508 538 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 KLRD1Q13241 179 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 KIR2DS1Q14954 304 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 C17orf58Q2M2W7 97 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 ZNF880Q6PDB4 577 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 C5orf24Q7Z6I8 188 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 OR52I2Q8NH67 350 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 CORO2AQ92828 525 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 KIRREL1Q96J84 757 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 ABHD1Q96SE0 405 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 TMPRSS13Q9BYE2 586 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 SCPEP1Q9HB40 452 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 YAE1D1Q9NRH1 226 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 IDI2-AS1Q9NZ38 188 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 OPN4Q9UHM6 478 aa11.14□□□□□ -0.63
CPNE1-227ENST00000498056 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 C15orf65H3BRN8 121 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 J3QLI3 93 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 SDCBPO00560 298 aaPredicted RBP11.13□□□□□ -0.63
CPNE1-227ENST00000498056 ORC5O43913 435 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 MMP23AO75900 390 aa11.13□□□□□ -0.63
CPNE1-227ENST00000498056 RBP4P02753 201 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms