RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CCDC124Q96CT7 223 aaKnown RBP1.35□□□□□ -2.19
PSPC1-205ENST00000497722 AICDAQ9GZX7 198 aa1.35□□□□□ -2.19
PSPC1-205ENST00000497722 RAB1BQ9H0U4 201 aa1.35□□□□□ -2.19
PSPC1-205ENST00000497722 METTL8Q9H825 291 aaKnown RBP1.35□□□□□ -2.19
PSPC1-205ENST00000497722 ZNF286AQ9HBT8 521 aa1.35□□□□□ -2.19
PSPC1-205ENST00000497722 TAS2R13Q9NYV9 303 aa1.35□□□□□ -2.19
PSPC1-205ENST00000497722 HSPE1-MOB4S4R3N1 261 aa1.35□□□□□ -2.19
PSPC1-205ENST00000497722 ITGB4P16144 1822 aa1.35□□□□□ -2.19
PSPC1-205ENST00000497722 ABCB11O95342 1321 aa1.35□□□□□ -2.19
PSPC1-205ENST00000497722 F8VP50 259 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 CRXO43186 299 aaPredicted RBP1.34□□□□□ -2.19
PSPC1-205ENST00000497722 FGF16O43320 207 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 TRAPPC3O43617 180 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 CDK14O94921 469 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 LDOC1O95751 146 aaPredicted RBP1.34□□□□□ -2.19
PSPC1-205ENST00000497722 FBP1P09467 338 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 TSPOP30536 169 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 SULT1A2P50226 295 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 ZNF140P52738 457 aaPredicted RBP1.34□□□□□ -2.19
PSPC1-205ENST00000497722 DYNLL1P63167 89 aaKnown RBP1.34□□□□□ -2.19
PSPC1-205ENST00000497722 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 FAM183BPQ6ZVS7 135 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 SSX7Q7RTT5 188 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 SCXQ7RTU7 201 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 FAM19A1Q7Z5A9 133 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 KRTCAP2Q8N6L1 136 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 TMEM239Q8WW34 195 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 MRAP2Q96G30 205 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 NAP1L5Q96NT1 182 aaPredicted RBP1.34□□□□□ -2.19
PSPC1-205ENST00000497722 B9D2Q9BPU9 175 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 XKR8Q9H6D3 395 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 DMAC2Q9NW81 257 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 CLEC2DQ9UHP7 191 aa1.34□□□□□ -2.19
PSPC1-205ENST00000497722 TBL2Q9Y4P3 447 aaKnown RBP1.34□□□□□ -2.19
PSPC1-205ENST00000497722 PTPRKQ15262 1439 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 FNDC10F2Z333 226 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 LECT2O14960 151 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 NQO1P15559 274 aaKnown RBP1.33□□□□□ -2.2
PSPC1-205ENST00000497722 UGT2B10P36537 528 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 PPP1CCP36873 323 aaKnown RBP1.33□□□□□ -2.2
PSPC1-205ENST00000497722 MAGEA3P43357 314 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 INPP1P49441 399 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 OR2B6P58173 313 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 XIAPP98170 497 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 DEFA6Q01524 100 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 PDK2Q15119 407 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 CLEC20AQ6ZU45 233 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 MUC15Q8N387 334 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 ACBD4Q8NC06 268 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 OR10P1Q8NGE3 313 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 FAM45AQ8TCE6 357 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 GALMQ96C23 342 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 EBPLQ9BY08 206 aa1.33□□□□□ -2.2
PSPC1-205ENST00000497722 NXT1Q9UKK6 140 aaKnown RBP1.33□□□□□ -2.2
PSPC1-205ENST00000497722 ATRNO75882 1429 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 IGSF23A1L1A6 192 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 C17orf98A8MV24 154 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 EFCAB9A8MZ26 197 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 BOLA2-SMG1P6H3BVE0 249 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 SULT1C2O00338 296 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 SHOX2O60902 331 aaPredicted RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 CRYGDP07320 174 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 LPAR6P43657 344 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 AQP5P55064 265 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 CD164Q04900 197 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 PAFAH1B3Q15102 231 aaKnown RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 C18orf21Q32NC0 220 aaPredicted RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 TTC33Q6PID6 262 aaPredicted RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 FAM19A3Q7Z5A8 133 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 MRPL52Q86TS9 123 aaKnown RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 C2orf73Q8N5S3 287 aaPredicted RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 ZIC4Q8N9L1 334 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 OR4C16Q8NGL9 310 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 CCDC12Q8WUD4 166 aaPredicted RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 PPWD1Q96BP3 646 aaKnown RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 CCDC127Q96BQ5 260 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 CAPZA3Q96KX2 299 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 TXNDC17Q9BRA2 123 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 ALX4Q9H161 411 aaPredicted RBP1.32□□□□□ -2.2
PSPC1-205ENST00000497722 CHMP5Q9NZZ3 219 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 COMMD9Q9P000 198 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 FBXL3Q9UKT7 428 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 FIS1Q9Y3D6 152 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 LINC00588Q9Y4M8 146 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 ALG5Q9Y673 324 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 DOCK6Q96HP0 2047 aa1.32□□□□□ -2.2
PSPC1-205ENST00000497722 OTOGLQ3ZCN5 2332 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 IGHV3OR15-7A0A075B7D8 119 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 LOC100506127A0A0U1RQW1 187 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 LOC102725191A0A1B0GVB3 256 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 PLPP3O14495 311 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 CDIPTO14735 213 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 DENRO43583 198 aaKnown RBP1.31□□□□□ -2.2
PSPC1-205ENST00000497722 TNFAIP8O95379 198 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 NQO2P16083 231 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 SPAM1P38567 509 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 OR8G1Q15617 311 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 Q3ZCU0 254 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 FAM162BQ5T6X4 162 aa1.31□□□□□ -2.2
PSPC1-205ENST00000497722 Q6ZT83 130 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms