RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 SDHAF2Q9NX18 166 aa2.37□□□□□ -2.03
VPS36-206ENST00000497149 CYB5R1Q9UHQ9 305 aa2.37□□□□□ -2.03
VPS36-206ENST00000497149 RAB22AQ9UL26 194 aa2.37□□□□□ -2.03
VPS36-206ENST00000497149 GINS2Q9Y248 185 aa2.37□□□□□ -2.03
VPS36-206ENST00000497149 MMACHCQ9Y4U1 282 aa2.37□□□□□ -2.03
VPS36-206ENST00000497149 RPRD2Q5VT52 1461 aaKnown RBP2.37□□□□□ -2.03
VPS36-206ENST00000497149 ABCB11O95342 1321 aa2.37□□□□□ -2.03
VPS36-206ENST00000497149 CPDO75976 1380 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 MTUS2Q5JR59 1369 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 LOXHD1Q8IVV2 1947 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 NPHP4O75161 1426 aaPredicted RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 TRAV8-7A0A075B6U6 113 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 A0A0G2JMP0 313 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 A0A0X1KG70 313 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 ZNF729A6NN14 1252 aaPredicted RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 EFCAB9A8MZ26 197 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 MIF4GDA9UHW6 222 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 FTCDNL1E5RQL4 147 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 H7C2Y5 167 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 J3QT63 122 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 KCNK1O00180 336 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 PSMD12O00232 456 aaPredicted RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 TRAPPC6AO75865 159 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 OR2B3O76000 313 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 SNAP29O95721 258 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 RLN2P04090 185 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 TCRBP04435 133 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 PFN1P07737 140 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 C8orf88P0DMB2 117 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 GTF2F2P13984 249 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 PSMA1P25786 263 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 ACOT2P49753 483 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 HCCSP53701 268 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 RAB8AP61006 207 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 LSM6P62312 80 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 GRB2P62993 217 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 RPL19P84098 196 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 FAM3AP98173 230 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 TFAMQ00059 246 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 POU6F1Q14863 301 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 TAL2Q16559 108 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 FBXL19-AS1Q494R0 122 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 ACSM3Q53FZ2 586 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 ACTL10Q5JWF8 245 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 BRMS1LQ5PSV4 323 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 TMEM69Q5SWH9 247 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 ZNF678Q5SXM1 525 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 CPTPQ5TA50 214 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 NIPAL1Q6NVV3 410 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 PHF13Q86YI8 300 aaPredicted RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 CLVS1Q8IUQ0 354 aaPredicted RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 PXT1Q8NFP0 134 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 OR2Y1Q8NGV0 311 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 OR10J5Q8NHC4 309 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 RNASEH2CQ8TDP1 164 aaKnown RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 TESCQ96BS2 214 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 PHB2Q99623 299 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 SEC22CQ9BRL7 303 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 SHANK2-AS3Q9BTD1 123 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 DDA1Q9BW61 102 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 RDH14Q9HBH5 336 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 TMBIM4Q9HC24 238 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.36□□□□□ -2.03
VPS36-206ENST00000497149 FBXL3Q9UKT7 428 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 MTCH2Q9Y6C9 303 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 ENPP4Q9Y6X5 453 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 CCDC171Q6TFL3 1326 aa2.36□□□□□ -2.03
VPS36-206ENST00000497149 C9orf84Q5VXU9 1444 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.35□□□□□ -2.03
VPS36-206ENST00000497149 KIR2DS1A0A191URI9 304 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 SLC5A10A0PJK1 596 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 BIRC5O15392 142 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 FABP7O15540 132 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 NDUFA2O43678 99 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 ENSAO43768 121 aaKnown RBP2.35□□□□□ -2.03
VPS36-206ENST00000497149 ATP6V1G2O95670 118 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 IFNA16P05015 189 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 GUSBP08236 651 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 ZNF35P13682 527 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 UGT2B7P16662 529 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 F8A1P23610 371 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 CRABP1P29762 137 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 GABRA4P48169 554 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 STC1P52823 247 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 ADIGQ0VDE8 80 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 MAPK14Q16539 360 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 DPPA2Q7Z7J5 298 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 DAZ4Q86SG3 579 aaKnown RBP2.35□□□□□ -2.03
VPS36-206ENST00000497149 PDPNQ86YL7 162 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 UBL4BQ8N7F7 174 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 KCTD4Q8WVF5 259 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 RAB8BQ92930 207 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 BORCS5Q969J3 196 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 TLCD1Q96CP7 247 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 TSC22D3Q99576 134 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 TSNAXQ99598 290 aaKnown RBP2.35□□□□□ -2.03
VPS36-206ENST00000497149 APOL4Q9BPW4 351 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 AIF1LQ9BQI0 150 aa2.35□□□□□ -2.03
VPS36-206ENST00000497149 TMED9Q9BVK6 235 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms