RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 TMEM200BQ69YZ2 307 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 RBMS3Q6XE24 437 aaKnown RBP5.01□□□□□ -1.61
HMGCL-206ENST00000496907 C8orf86Q6ZUL3 223 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 IL17RELQ6ZVW7 336 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 MOB1BQ7L9L4 216 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 TRAPPC6BQ86SZ2 158 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 FAM185AQ8N0U4 392 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 GAPTQ8N292 157 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 TMEM104Q8NE00 496 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 OR4S1Q8NGB4 309 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 OR10R2Q8NGX6 335 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 FAM216AQ8WUB2 273 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 EDARADDQ8WWZ3 215 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 TNFRSF14Q92956 283 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 DACT3Q96B18 629 aaPredicted RBP5.01□□□□□ -1.61
HMGCL-206ENST00000496907 GFI1Q99684 422 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 CHST6Q9GZX3 395 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 LPAR5Q9H1C0 372 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 ATG5Q9H1Y0 275 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 ABCG5Q9H222 651 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 BANF2Q9H503 90 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 LINC00574Q9H8X3 128 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.01□□□□□ -1.61
HMGCL-206ENST00000496907 ETAA1Q9NY74 926 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 ONECUT1Q9UBC0 465 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 RSL24D1Q9UHA3 163 aaKnown RBP5.01□□□□□ -1.61
HMGCL-206ENST00000496907 NUP50Q9UKX7 468 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 TRAPPC2LQ9UL33 140 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 A3GALT2U3KPV4 340 aa5.01□□□□□ -1.61
HMGCL-206ENST00000496907 TRRAPQ9Y4A5 3859 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 A0A075B6Q4 140 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 TRBV6-6A0A0A6YYG2 114 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 TMEM272A0A1B0GTI8 110 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 KBTBD11-OT1A0A1B0GTJ5 212 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 SHISA3A0PJX4 238 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 C22orf46C9J442 243 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 TOR1AO14656 332 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 XRCC3O43542 346 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 RGS11O94810 467 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 DIRAS3O95661 229 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 LPLP06858 475 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 CD3GP09693 182 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 CHATP28329 748 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 CEACAM3P40198 252 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 KIR2DS4P43632 304 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 CBX5P45973 191 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 UBE2E1P51965 193 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 SNU13P55769 128 aaKnown RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 LGALS4P56470 323 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 OR10A3P58181 314 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 SEC61A1P61619 476 aaKnown RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 VBP1P61758 197 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 NCS1P62166 190 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 LSM3P62310 102 aaKnown RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 AESQ08117 197 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 UNC119Q13432 240 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 EDDM3AQ14507 147 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 KIR2DS1Q14954 304 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 MIDNQ504T8 468 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 UBE2NLQ5JXB2 153 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 LY6G6FQ5SQ64 297 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 FAM120AOSQ5T036 256 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 RSBN1Q5VWQ0 802 aaPredicted RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 BAIAP2L2Q6UXY1 529 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 HEPN1Q6WQI6 88 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 ZNF497Q6ZNH5 498 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 RNF144BQ7Z419 303 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 ZNF596Q8TC21 504 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 GALMQ96C23 342 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 CMSS1Q9BQ75 279 aaKnown RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 TMPRSS13Q9BYE2 586 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 MS4A7Q9GZW8 240 aaPredicted RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 SIRPDQ9H106 197 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 PPA2Q9H2U2 334 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 CHMP1AQ9HD42 196 aaPredicted RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 MMP26Q9NRE1 261 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 RHBDL2Q9NX52 303 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 CCDC59Q9P031 241 aaKnown RBP5□□□□□ -1.61
HMGCL-206ENST00000496907 SESN1Q9Y6P5 492 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 HYDINQ4G0P3 5121 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
HMGCL-206ENST00000496907 ELOA3CA0A087WX78 387 aaPredicted RBP4.99□□□□□ -1.61
HMGCL-206ENST00000496907 A0A087X0M5 115 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 A0A1B0GX30 115 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 OOSP1A8MZH6 123 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 NPIPB11E5RHQ5 1161 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 RAB27BO00194 218 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 SULT1C2O00338 296 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 PAX4O43316 350 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 MELTFP08582 738 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 SLC2A2P11168 524 aaPredicted RBP4.99□□□□□ -1.61
HMGCL-206ENST00000496907 HIST1H1DP16402 221 aaKnown RBP4.99□□□□□ -1.61
HMGCL-206ENST00000496907 EPHA1P21709 976 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 DTYMKP23919 212 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 GLIPR1P48060 266 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 CEBPDP49716 269 aaPredicted RBP4.99□□□□□ -1.61
HMGCL-206ENST00000496907 TMEM50BP56557 158 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 CLDN12P56749 244 aa4.99□□□□□ -1.61
HMGCL-206ENST00000496907 MRPS10P82664 201 aaKnown RBP4.99□□□□□ -1.61
HMGCL-206ENST00000496907 HTD2P86397 168 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms