RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	ABHD14B	Q96IU4	210 aa		7.15	□□□□□ -1.27
CRNKL1-205	ENST00000496549	VN1R3	Q9BXE9	311 aa		7.15	□□□□□ -1.27
CRNKL1-205	ENST00000496549	TRAV26-1	A0A087WT03	109 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	C9orf172	C9J069	976 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ADAM20	O43506	726 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CD5L	O43866	347 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CD55	P08174	381 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PMP22	Q01453	160 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	FAM78A	Q5JUQ0	283 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SPRYD7	Q5W111	196 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	GPR146	Q96CH1	333 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ADAT3	Q96EY9	351 aa	Predicted RBP	7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	OR2A5	Q96R48	311 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	HINT2	Q9BX68	163 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	FNDC4	Q9H6D8	234 aa	Predicted RBP	7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	RPRM	Q9NS64	109 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	IGHV2-26	A0A0B4J1V2	119 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CTXND1	A0A1B0GTU2	59 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PAGE4	O60829	102 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CLDN1	O95832	211 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	FTH1P19	P0C7X4	201 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	OR1D2	P34982	312 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	RRAD	P55042	308 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	UBE2G1	P62253	170 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SUPT4H1	P63272	117 aa	Known RBP	7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PSG9	Q00887	426 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	EXOSC7	Q15024	291 aa	Known RBP	7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	DEFB134	Q4QY38	66 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PYGO2	Q9BRQ0	406 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PECR	Q9BY49	303 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	TMEM38B	Q9NVV0	291 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PSENEN	Q9NZ42	101 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SPCS1	Q9Y6A9	102 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CXCL11	O14625	94 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	LDB3	O75112	727 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SCGB2A1	O75556	95 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	NDUFB8	O95169	186 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ZNF205	O95201	554 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	THY1	P04216	161 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	GP1BB	P13224	206 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	UQCRFS1	P47985	274 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	HSD52	Q0P140	79 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	HNRNPA1L2	Q32P51	320 aa	Known RBP	7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	TSPO2	Q5TGU0	170 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	NRSN1	Q8IZ57	195 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	OR52M1	Q8NGK5	317 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	FBXO34	Q9NWN3	711 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	OR1A1	Q9P1Q5	309 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ZNF835	Q9Y2P0	537 aa		7.14	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PDE4DIP	Q5VU43	2346 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	TRAV9-1	A0A075B6T8	112 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549		A0A0G2JMM0	328 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	UBE2L5P	A0A1B0GUS4	154 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549		A0A1W2PPB8	328 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	KIR3DP1	A8MWS1	328 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549		J3KRW8	73 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CHST1	O43916	411 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	FAH	P16930	419 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	EN2	P19622	333 aa	Predicted RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PPOX	P50336	477 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	RPL18	Q07020	188 aa	Known RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	TDRG1	Q3Y452	100 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ZNF788	Q6ZQV5	615 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	C5orf17	Q8NAS9	161 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	HS3ST3A1	Q9Y663	406 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	TDRD15	B5MCY1	1934 aa	Known RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	C3orf85	A0A1B0GTC6	90 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	NKX2-6	A6NCS4	301 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ADH4	P08319	380 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	LINC00869	P0C866	280 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SMIM17	P0DL12	118 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CCR5	P51681	352 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SEC11A	P67812	179 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PRDX1	Q06830	199 aa	Known RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	TIGIT	Q495A1	244 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SPANXN5	Q5MJ07	72 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ZPLD1	Q8TCW7	415 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PMCHL2	Q9BQD1	86 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	AGMAT	Q9BSE5	352 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ST20	Q9HBF5	79 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	C19orf53	Q9UNZ5	99 aa	Predicted RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	VDAC3	Q9Y277	283 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SPINK4	O60575	86 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SAP30	O75446	220 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ZNF324	O75467	553 aa	Predicted RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	IGFBP6	P24592	240 aa	Predicted RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CD52	P31358	61 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	RTN4RL2	Q86UN3	420 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	CALHM1	Q8IU99	346 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	LINC00346	Q8IVM7	164 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	OR10G9	Q8NGN4	311 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	OR10G7	Q8NGN6	311 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	OR10AG1	Q8NH19	301 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	POM121L2	Q96KW2	1035 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	NYNRIN	Q9P2P1	1898 aa	Known RBP	7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ANXA10	Q9UJ72	324 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	PSG11	Q9UQ72	335 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	ALPK3	Q96L96	1907 aa		7.13	□□□□□ -1.27
CRNKL1-205	ENST00000496549	IGSF23	A1L1A6	192 aa		7.12	□□□□□ -1.27
CRNKL1-205	ENST00000496549	SPINT1	O43278	529 aa		7.12	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms