RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 LINC00596Q86U02 117 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 ZNF329Q86UD4 541 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 OR8H3Q8N146 312 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 C5orf56Q8N8D9 126 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 ZFP41Q8N8Y5 198 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 OR10A7Q8NGE5 316 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 CCDC107Q8WV48 283 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 NOL4LQ96MY1 436 aaPredicted RBP10.27□□□□□ -0.77
FN1-226ENST00000496542 ZNF184Q99676 751 aaPredicted RBP10.27□□□□□ -0.77
FN1-226ENST00000496542 IFT22Q9H7X7 185 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 PAK1IP1Q9NWT1 392 aaPredicted RBP10.27□□□□□ -0.77
FN1-226ENST00000496542 BABAM2Q9NXR7 383 aa10.27□□□□□ -0.77
FN1-226ENST00000496542 DIMT1Q9UNQ2 313 aaKnown RBP10.27□□□□□ -0.77
FN1-226ENST00000496542 MAGEA13PA6NCF6 341 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 SERPINE3A8MV23 424 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 CCRL2O00421 344 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 EBAG9O00559 213 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 OGG1O15527 345 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 LRRC36Q1X8D7 754 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 SLC16A12Q6ZSM3 486 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 MOB3BQ86TA1 216 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 GHSRQ92847 366 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 ARL11Q969Q4 196 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 RCC1LQ96I51 464 aaKnown RBP10.26□□□□□ -0.77
FN1-226ENST00000496542 CHCHD3Q9NX63 227 aaKnown RBP10.26□□□□□ -0.77
FN1-226ENST00000496542 CKLFQ9UBR5 152 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 LINC00527Q9UJ94 153 aa10.26□□□□□ -0.77
FN1-226ENST00000496542 TRAV8-7A0A075B6U6 113 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 IGHV3-43A0A0B4J1X8 118 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 IGHV3-72A0A0B4J1Y9 119 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 TRBV5-5A0A0J9YX44 114 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 PNMA8CA0A1B0GUJ8 204 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 C15orf65H3BRN8 121 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 SDCBPO00560 298 aaPredicted RBP10.25□□□□□ -0.77
FN1-226ENST00000496542 FGF16O43320 207 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 ZNF780AO75290 641 aaPredicted RBP10.25□□□□□ -0.77
FN1-226ENST00000496542 IGHV3-43DP0DP04 118 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 GTF2F2P13984 249 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 IGFBP3P17936 291 aaPredicted RBP10.25□□□□□ -0.77
FN1-226ENST00000496542 GZMHP20718 246 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 RPL23AP62750 156 aaKnown RBP10.25□□□□□ -0.77
FN1-226ENST00000496542 MED21Q13503 144 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 MPV17LQ2QL34 196 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 Q499Y3 187 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 DMKNQ6E0U4 476 aaPredicted RBP10.25□□□□□ -0.77
FN1-226ENST00000496542 FAM53AQ6NSI3 398 aaPredicted RBP10.25□□□□□ -0.77
FN1-226ENST00000496542 STX19Q8N4C7 294 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 JAGN1Q8N5M9 183 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 SETD9Q8NE22 299 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 CHPT1Q8WUD6 406 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 MUL1Q969V5 352 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 TMEM80Q96HE8 168 aa10.25□□□□□ -0.77
FN1-226ENST00000496542 IGHV1-3A0A0C4DH29 117 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 A0A1W2PPK0 400 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 NCBP2LA6PVI3 153 aaKnown RBP10.24□□□□□ -0.77
FN1-226ENST00000496542 NUDT19A8MXV4 375 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 AIPO00170 330 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 GAPDHP04406 335 aaKnown RBP10.24□□□□□ -0.77
FN1-226ENST00000496542 FSTP19883 344 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 ZNF816Q0VGE8 651 aaPredicted RBP10.24□□□□□ -0.77
FN1-226ENST00000496542 YIF1BQ5BJH7 314 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 TTC23Q5W5X9 447 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 ETV3LQ6ZN32 361 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 ZNF497Q6ZNH5 498 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 C18orf65Q6ZTR6 163 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 OR2W3Q7Z3T1 314 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 SLC35E3Q7Z769 313 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 LINC00482Q8N8I6 264 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 OR51D1Q8NGF3 324 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 OR14A2Q96R54 314 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 GFOD1Q9NXC2 390 aa10.24□□□□□ -0.77
FN1-226ENST00000496542 MRPS28Q9Y2Q9 187 aaKnown RBP10.24□□□□□ -0.77
FN1-226ENST00000496542 K7EIL1 84 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 DUS4LO95620 317 aaKnown RBP10.23□□□□□ -0.77
FN1-226ENST00000496542 MT-ND4P03905 459 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 MAS1P04201 325 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 IL3RAP26951 378 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
FN1-226ENST00000496542 RPS11P62280 158 aaKnown RBP eCLIP10.23□□□□□ -0.77
FN1-226ENST00000496542 SLC35B1P78383 322 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 ST3GAL4Q11206 333 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 GPR176Q14439 515 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 AWAT2Q6E213 333 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 GLIPR1L1Q6UWM5 242 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 FOXRED2Q8IWF2 684 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 MRPL41Q8IXM3 137 aaKnown RBP10.23□□□□□ -0.77
FN1-226ENST00000496542 IZUMO1Q8IYV9 350 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 DHRSXQ8N5I4 330 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 LINC00311Q8N616 119 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 KLHL30-AS1Q8NEE0 82 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 OR52M1Q8NGK5 317 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 GGHQ92820 318 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 EAF1Q96JC9 268 aaPredicted RBP10.23□□□□□ -0.77
FN1-226ENST00000496542 PGLYRP3Q96LB9 341 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 SPACA1Q9HBV2 294 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 ETAA1Q9NY74 926 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 GNG12Q9UBI6 72 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 TRAPPC2LQ9UL33 140 aa10.23□□□□□ -0.77
FN1-226ENST00000496542 TRBV5-7A0A0A0MS05 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms