RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 HSPE1-MOB4S4R3N1 261 aa11.35□□□□□ -0.59
VTI1A-209ENST00000496445 PNMA8CA0A1B0GUJ8 204 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 A0A1W2PPK0 400 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 TMEM30CPA0ZSE6 113 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 C15orf65H3BRN8 121 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 CAPGP40121 348 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 MADCAM1Q13477 382 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 MPV17LQ2QL34 196 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 OGFRL1Q5TC84 451 aaPredicted RBP11.34□□□□□ -0.59
VTI1A-209ENST00000496445 FAM53AQ6NSI3 398 aaPredicted RBP11.34□□□□□ -0.59
VTI1A-209ENST00000496445 LYPD6Q86Y78 171 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 THNSL2Q86YJ6 484 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 UBALD1Q8TB05 177 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 MUL1Q969V5 352 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 S100A13Q99584 98 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 PCDHB16Q9NRJ7 776 aa11.34□□□□□ -0.59
VTI1A-209ENST00000496445 PAK1IP1Q9NWT1 392 aaPredicted RBP11.34□□□□□ -0.59
VTI1A-209ENST00000496445 CNOT2Q9NZN8 540 aaKnown RBP11.34□□□□□ -0.59
VTI1A-209ENST00000496445 RCC2Q9P258 522 aaKnown RBP11.34□□□□□ -0.59
VTI1A-209ENST00000496445 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 M0QZK8 103 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 HSD17B6O14756 317 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 CASQ2O14958 399 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-209ENST00000496445 PIN1P1O15428 100 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 ZNF780AO75290 641 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-209ENST00000496445 FAM106CPP0CH98 169 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 GTF2F2P13984 249 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 MED21Q13503 144 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 C9orf152Q5JTZ5 239 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 GLIPR1L1Q6UWM5 242 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 ZNF497Q6ZNH5 498 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 SLC16A12Q6ZSM3 486 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 AHSA2Q719I0 299 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 CENPVQ7Z7K6 275 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-209ENST00000496445 C8orf59Q8N0T1 100 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-209ENST00000496445 OR10X1Q8NGY0 326 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 CCDC107Q8WV48 283 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 MYDGFQ969H8 173 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 PHF21AQ96BD5 680 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 DERL3Q96Q80 235 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 FKBP14Q9NWM8 211 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 CHCHD3Q9NX63 227 aaKnown RBP11.33□□□□□ -0.6
VTI1A-209ENST00000496445 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.33□□□□□ -0.6
VTI1A-209ENST00000496445 CKLFQ9UBR5 152 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 PSORS1C1Q9UIG5 152 aa11.33□□□□□ -0.6
VTI1A-209ENST00000496445 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
VTI1A-209ENST00000496445 TCRBV4S1A1TA0A5B7 111 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 IGKV1D-33P01593 117 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 IGKV1-33P01594 117 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 MAS1P04201 325 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 TMEM11P17152 192 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 RAB7AP51149 207 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 LOXL3P58215 753 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 TAS2R43P59537 309 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 ZNF816Q0VGE8 651 aaPredicted RBP11.32□□□□□ -0.6
VTI1A-209ENST00000496445 Q6ZPA2 131 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 OR8H3Q8N146 312 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 JAGN1Q8N5M9 183 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 LINC00311Q8N616 119 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 PLCXD1Q9NUJ7 323 aa11.32□□□□□ -0.6
VTI1A-209ENST00000496445 TSSC4Q9Y5U2 329 aaPredicted RBP11.32□□□□□ -0.6
VTI1A-209ENST00000496445 IGHV3-43A0A0B4J1X8 118 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 AIPO00170 330 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 MYL12BO14950 172 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 MT-ND4P03905 459 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 CD1AP06126 327 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 IGHV3-43DP0DP04 118 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 PF4V1P10720 104 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 REG1BP48304 166 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 WNT4P56705 351 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 HES1Q14469 280 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 AWAT2Q6E213 333 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 GAPTQ8N292 157 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 TMEM104Q8NE00 496 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 WFDC9Q8NEX5 89 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 BPIFB6Q8NFQ5 453 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 OR4X2Q8NGF9 303 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 OR52M1Q8NGK5 317 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 NEK7Q8TDX7 302 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 ARL11Q969Q4 196 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 GFOD1Q9NXC2 390 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 COL7A1Q02388 2944 aa11.31□□□□□ -0.6
VTI1A-209ENST00000496445 IGHV1-3A0A0C4DH29 117 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 C12orf77C9JDV5 145 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 CCRL2O00421 344 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 SDCBPO00560 298 aaPredicted RBP11.3□□□□□ -0.6
VTI1A-209ENST00000496445 SLC31A2O15432 143 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 FGF16O43320 207 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 ORC5O43913 435 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 IGLL1P15814 213 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 CELP19835 753 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 GZMHP20718 246 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 EBI3Q14213 229 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 GPR176Q14439 515 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 HNF4GQ14541 408 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 INSL4Q14641 139 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 IZUMO1Q8IYV9 350 aa11.3□□□□□ -0.6
VTI1A-209ENST00000496445 STX19Q8N4C7 294 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms