RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 MSI2Q96DH6 328 aaKnown RBP17.92■□□□□ 0.46
FGFR1-223ENST00000496296 DEDDO75618 318 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 CTXN2P0C2S0 81 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 OR5AC1P0C628 307 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 CD40P25942 277 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 GLRXP35754 106 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 KCNJ3P48549 501 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 LDLRAD3Q86YD5 345 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 FZR1Q9UM11 496 aa17.92■□□□□ 0.46
FGFR1-223ENST00000496296 SHANK1Q9Y566 2161 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 KIR2DS1A0A191URI9 304 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 TMEM210A6NLX4 147 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 J3QT63 122 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 TUSC2O75896 110 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 PRB1P04280 392 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 PTAFRP25105 342 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 KIR2DS4P43632 304 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 KIR2DS1Q14954 304 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 FAM76BQ5HYJ3 339 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 ZNF880Q6PDB4 577 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 C22orf34Q6ZV56 151 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 WFDC8Q8IUA0 241 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 LGI3Q8N145 548 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 SPERTQ8NA61 448 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 GSKIPQ9P0R6 139 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 POLDIP2Q9Y2S7 368 aa17.91■□□□□ 0.46
FGFR1-223ENST00000496296 KCNAB3O43448 404 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 HKR1P10072 659 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 FXYD4P59646 89 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 EIF5AP63241 154 aaKnown RBP17.9■□□□□ 0.46
FGFR1-223ENST00000496296 MZT1Q08AG7 82 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 GLYATL2Q8WU03 294 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 NGBQ9NPG2 151 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 ZFP57Q9NU63 452 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 ATP23Q9Y6H3 246 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 TRDCB7Z8K6 153 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 ATP6V1G2-DDX39BF2Z307 99 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 NKX6-1P78426 367 aaPredicted RBP17.9■□□□□ 0.46
FGFR1-223ENST00000496296 SRPXP78539 464 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 STPG2Q8N412 459 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 LRRC46Q96FV0 321 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 CXXC4Q9H2H0 198 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 DUSP13Q9UII6 198 aa17.9■□□□□ 0.46
FGFR1-223ENST00000496296 SELENOVP59797 346 aa17.89■□□□□ 0.45
FGFR1-223ENST00000496296 IGSF11Q5DX21 431 aa17.89■□□□□ 0.45
FGFR1-223ENST00000496296 FAM58AQ8N1B3 248 aa17.89■□□□□ 0.45
FGFR1-223ENST00000496296 PLEKHA2Q9HB19 425 aa17.89■□□□□ 0.45
FGFR1-223ENST00000496296 IL36RNQ9UBH0 155 aa17.89■□□□□ 0.45
FGFR1-223ENST00000496296 ESPL1Q14674 2120 aa17.89■□□□□ 0.45
FGFR1-223ENST00000496296 DIRAS3O95661 229 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 PRKACAP17612 351 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 KLF3P57682 345 aaPredicted RBP17.88■□□□□ 0.45
FGFR1-223ENST00000496296 S100A10P60903 97 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 SMCO1Q147U7 214 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 PHLDA2Q53GA4 152 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 UQCC3Q6UW78 93 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 BATF2Q8N1L9 274 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 SUMF2Q8NBJ7 301 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 RP1L1Q8IWN7 2480 aaPredicted RBP17.88■□□□□ 0.45
FGFR1-223ENST00000496296 RAB19A4D1S5 217 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 H0YL77 283 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 LGALS8O00214 317 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 MPPED1O15442 326 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 ZNF205O95201 554 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 TK1P04183 234 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 GAPDHP04406 335 aaKnown RBP17.88■□□□□ 0.45
FGFR1-223ENST00000496296 VHLLQ6RSH7 139 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 Q8IYB0 196 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 SCCPDHQ8NBX0 429 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 MRPL30Q8TCC3 161 aaKnown RBP17.88■□□□□ 0.45
FGFR1-223ENST00000496296 TREM2Q9NZC2 230 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 FBXO9Q9UK97 447 aaPredicted RBP17.88■□□□□ 0.45
FGFR1-223ENST00000496296 TMED3Q9Y3Q3 217 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 SPTA1P02549 2419 aa17.88■□□□□ 0.45
FGFR1-223ENST00000496296 NUDT19A8MXV4 375 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 IGHV3-13P01766 116 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 THBDP07204 575 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 ZNF154Q13106 437 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 HERPUD1Q15011 391 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 SHEQ5VZ18 495 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 WDR86Q86TI4 376 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 NUP37Q8NFH4 326 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 LHFPL5Q8TAF8 219 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 RNF141Q8WVD5 230 aa17.87■□□□□ 0.45
FGFR1-223ENST00000496296 TRAV24A0A0B4J272 114 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 FAM90A27PA6NNH2 459 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 MLNRO43193 412 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 GRPP07492 148 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 ACAA1P09110 424 aaPredicted RBP17.86■□□□□ 0.45
FGFR1-223ENST00000496296 FAM157CP0CG43 387 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 DUSP1P28562 367 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 GNRHRP30968 328 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 ERVK11-1P61568 191 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 SP6Q3SY56 376 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 FBXL19-AS1Q494R0 122 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 OR11L1Q8NGX0 322 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 TMEM171Q8WVE6 324 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 TMEM56Q96MV1 263 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 MSL2Q9HCI7 577 aa17.86■□□□□ 0.45
FGFR1-223ENST00000496296 TMEM56-RWDD3S4R434 201 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms