RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZNF695Q8IW36 515 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 IZUMO1Q8IYV9 350 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 LINC00311Q8N616 119 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 OR52M1Q8NGK5 317 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 B9D2Q9BPU9 175 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 ING4Q9UNL4 249 aa18.32■□□□□ 0.52
COL27A1-208ENST00000494780 OR7C1O76099 320 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-208ENST00000494780 CSTBP04080 98 aaKnown RBP18.31■□□□□ 0.52
COL27A1-208ENST00000494780 LIMS3P0CW19 117 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 LIMS4P0CW20 117 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 RBM11P57052 281 aaKnown RBP18.31■□□□□ 0.52
COL27A1-208ENST00000494780 CCDC58Q4VC31 144 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 RPL22L1Q6P5R6 122 aaKnown RBP18.31■□□□□ 0.52
COL27A1-208ENST00000494780 TEX38Q6PEX7 206 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 UNQ9370/PRO34162Q6UXP9 181 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 LINC00596Q86U02 117 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 C8orf31Q8N9H6 132 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 OR52N1Q8NH53 320 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 EAF1Q96JC9 268 aaPredicted RBP18.31■□□□□ 0.52
COL27A1-208ENST00000494780 C9orf16Q9BUW7 83 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 TMEM138Q9NPI0 162 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 ZNF581Q9P0T4 197 aa18.31■□□□□ 0.52
COL27A1-208ENST00000494780 NBEAL2Q6ZNJ1 2754 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 AP4M1O00189 453 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 PPP3R1P63098 170 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 Q8N6K4 173 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 OR2T10Q8NGZ9 312 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 ARL11Q969Q4 196 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 TMEM106AQ96A25 262 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 S100A13Q99584 98 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 LIN7CQ9NUP9 197 aaKnown RBP18.3■□□□□ 0.52
COL27A1-208ENST00000494780 PAK1IP1Q9NWT1 392 aaPredicted RBP18.3■□□□□ 0.52
COL27A1-208ENST00000494780 COL7A1Q02388 2944 aa18.3■□□□□ 0.52
COL27A1-208ENST00000494780 LOC100130705A0A1B0GUX0 176 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 NCBP2LA6PVI3 153 aaKnown RBP18.29■□□□□ 0.52
COL27A1-208ENST00000494780 H0YHG0 523 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 C15orf65H3BRN8 121 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 SDCBPO00560 298 aaPredicted RBP18.29■□□□□ 0.52
COL27A1-208ENST00000494780 GEMIN2O14893 280 aaKnown RBP18.29■□□□□ 0.52
COL27A1-208ENST00000494780 ORC5O43913 435 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 IL3RAP26951 378 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 ZNF93P35789 620 aaPredicted RBP18.29■□□□□ 0.52
COL27A1-208ENST00000494780 GPR12P47775 334 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 REG1BP48304 166 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 GP2P55259 537 aaKnown RBP18.29■□□□□ 0.52
COL27A1-208ENST00000494780 PNLIPRP3Q17RR3 467 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 MPV17LQ2QL34 196 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 DDI2Q5TDH0 399 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 APH1BQ8WW43 257 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 GON7Q9BXV9 100 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 ABCG5Q9H222 651 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 FGF20Q9NP95 211 aaPredicted RBP18.29■□□□□ 0.52
COL27A1-208ENST00000494780 GFOD1Q9NXC2 390 aa18.29■□□□□ 0.52
COL27A1-208ENST00000494780 IGHV3-72A0A0B4J1Y9 119 aa18.28■□□□□ 0.52
COL27A1-208ENST00000494780 LINC01548A6NM66 108 aa18.28■□□□□ 0.52
COL27A1-208ENST00000494780 ZNF780AO75290 641 aaPredicted RBP18.28■□□□□ 0.52
COL27A1-208ENST00000494780 DGCR2P98153 550 aa18.28■□□□□ 0.52
COL27A1-208ENST00000494780 Q3ZCU0 254 aa18.28■□□□□ 0.52
COL27A1-208ENST00000494780 XAF1Q6GPH4 301 aa18.28■□□□□ 0.52
COL27A1-208ENST00000494780 C10orf67Q8IYJ2 551 aa18.28■□□□□ 0.52
COL27A1-208ENST00000494780 SLC29A1Q99808 456 aa18.28■□□□□ 0.52
COL27A1-208ENST00000494780 SERPINA2P20848 420 aa18.27■□□□□ 0.52
COL27A1-208ENST00000494780 CD1BP29016 333 aa18.27■□□□□ 0.52
COL27A1-208ENST00000494780 BDKRB2P30411 391 aa18.27■□□□□ 0.52
COL27A1-208ENST00000494780 ATAD3CQ5T2N8 411 aa18.27■□□□□ 0.52
COL27A1-208ENST00000494780 Q8N9W7 124 aa18.27■□□□□ 0.52
COL27A1-208ENST00000494780 ST6GALNAC6Q969X2 333 aa18.27■□□□□ 0.52
COL27A1-208ENST00000494780 RAX2Q96IS3 184 aa18.27■□□□□ 0.52
COL27A1-208ENST00000494780 CCL24O00175 119 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 DCKP27707 260 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 TMPRSS11AQ6ZMR5 421 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 TMEM104Q8NE00 496 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 NEK7Q8TDX7 302 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 CCDC107Q8WV48 283 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 RTN4IP1Q8WWV3 396 aaPredicted RBP18.26■□□□□ 0.51
COL27A1-208ENST00000494780 WWC2-AS2Q96NR7 200 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 DUX3Q96PT4 197 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 DCLRE1BQ9H816 532 aa18.26■□□□□ 0.51
COL27A1-208ENST00000494780 TENM3Q9P273 2699 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 RAMP3O60896 148 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 MOSP00540 346 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 MT-ND4P03905 459 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 RPLP1P05386 114 aaKnown RBP18.25■□□□□ 0.51
COL27A1-208ENST00000494780 GTF2F2P13984 249 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 ETV1P50549 477 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 FOXE3Q13461 319 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 RIPK1Q13546 671 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 GPR50Q13585 617 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 CXorf66Q5JRM2 361 aaPredicted RBP18.25■□□□□ 0.51
COL27A1-208ENST00000494780 ZNF497Q6ZNH5 498 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 STX19Q8N4C7 294 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 OR8H1Q8NGG4 311 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 OR8U1Q8NH10 309 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 UBALD1Q8TB05 177 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 RASL11BQ9BPW5 248 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 PLSCR3Q9NRY6 295 aa18.25■□□□□ 0.51
COL27A1-208ENST00000494780 IGHV3-43A0A0B4J1X8 118 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 AIPO00170 330 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 OGG1O15527 345 aa18.24■□□□□ 0.51
COL27A1-208ENST00000494780 TXNL1O43396 289 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms