RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 NDUFAF3Q9BU61 184 aa13.16□□□□□ -0.3
SDF4-207ENST00000494748 ZFAND5O76080 213 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 SRSF7Q16629 238 aaKnown RBP eCLIP13.15□□□□□ -0.3
SDF4-207ENST00000494748 ZNF787Q6DD87 383 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 OR10A7Q8NGE5 316 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 ULBP2Q9BZM5 246 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 FGF23Q9GZV9 251 aaPredicted RBP13.15□□□□□ -0.3
SDF4-207ENST00000494748 MTIF3Q9H2K0 278 aaKnown RBP13.15□□□□□ -0.3
SDF4-207ENST00000494748 ZNF442Q9H7R0 627 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 CCL28Q9NRJ3 127 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 H3BP45 60 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 HLA-HP01893 362 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 PATE4P0C8F1 98 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 FKBP2P26885 142 aaKnown RBP13.15□□□□□ -0.3
SDF4-207ENST00000494748 PDLIM4P50479 330 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 FUT6P51993 359 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 KMT5CQ86Y97 462 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 TGIF2LXQ8IUE1 241 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 GPR137CQ8N3F9 429 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 PROK2Q9HC23 129 aa13.15□□□□□ -0.3
SDF4-207ENST00000494748 A0A087WZY1 265 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 PIAS2O75928 621 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 FGF7P21781 194 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 FOXO1Q12778 655 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 P2RY6Q15077 328 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 SPIN3Q5JUX0 258 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 FGFBP3Q8TAT2 258 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 IL22RA2Q969J5 263 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 P2RX4Q99571 388 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 CTDSP1Q9GZU7 261 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 H0Y980 276 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 EREGO14944 169 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 NXPH1P58417 271 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 HNRNPKP61978 463 aaKnown RBP eCLIP13.14□□□□□ -0.31
SDF4-207ENST00000494748 CLN3Q13286 438 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 Q6ZRM9 215 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 BEND2Q8NDZ0 799 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 EXTL1Q92935 676 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 REPIN1Q9BWE0 567 aaKnown RBP13.14□□□□□ -0.31
SDF4-207ENST00000494748 SRXN1Q9BYN0 137 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 LCATP04180 440 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 LCN15Q6UWW0 184 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 RABEPKQ7Z6M1 372 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 WDR5BQ86VZ2 330 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 RNASE11Q8TAA1 199 aaKnown RBP13.14□□□□□ -0.31
SDF4-207ENST00000494748 GPR146Q96CH1 333 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
SDF4-207ENST00000494748 AGMATQ9BSE5 352 aa13.14□□□□□ -0.31
SDF4-207ENST00000494748 NPIPA2E9PIF3 369 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 NPIPA3F8WFD2 350 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 ZIC3O60481 467 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 OR7C1O76099 320 aaPredicted RBP13.13□□□□□ -0.31
SDF4-207ENST00000494748 ACSF3Q4G176 576 aaPredicted RBP13.13□□□□□ -0.31
SDF4-207ENST00000494748 WDR74Q6RFH5 385 aaPredicted RBP13.13□□□□□ -0.31
SDF4-207ENST00000494748 ZNF611Q8N823 705 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 TNRC6AQ8NDV7 1962 aaKnown RBP13.13□□□□□ -0.31
SDF4-207ENST00000494748 ZNF407Q9C0G0 2248 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 PGLYRP1O75594 196 aaPredicted RBP13.13□□□□□ -0.31
SDF4-207ENST00000494748 DFFBO76075 338 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 CST2P09228 141 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 EDN3P14138 238 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 IZUMO4Q1ZYL8 232 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 SLC25A26Q70HW3 274 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 ZNF525Q8N782 197 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 ZNF32P17041 273 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 PCSK4Q6UW60 755 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 C16orf82Q7Z2V1 217 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 MRPL37Q9BZE1 423 aaKnown RBP13.13□□□□□ -0.31
SDF4-207ENST00000494748 CRIM1Q9NZV1 1036 aa13.13□□□□□ -0.31
SDF4-207ENST00000494748 ARHGAP21Q5T5U3 1957 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 TNFSF12O43508 249 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 NUTF2P61970 127 aaKnown RBP13.12□□□□□ -0.31
SDF4-207ENST00000494748 OR51G1Q8NGK1 321 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 PSMG3Q9BT73 122 aaPredicted RBP13.12□□□□□ -0.31
SDF4-207ENST00000494748 RBKSQ9H477 322 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 TMEM38BQ9NVV0 291 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 VAX2Q9UIW0 290 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 GLB1P16278 677 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 PSG4Q00888 419 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 FBXO46Q6PJ61 603 aaPredicted RBP13.12□□□□□ -0.31
SDF4-207ENST00000494748 SLC25A45Q8N413 288 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 HIST1H2AAQ96QV6 131 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 WNT5BQ9H1J7 359 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 A0A0J9YW62 118 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 VAMP5O95183 116 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 PMS2P11Q13670 270 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 SYT13Q7L8C5 426 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 STX12Q86Y82 276 aa13.12□□□□□ -0.31
SDF4-207ENST00000494748 TK1P04183 234 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 CELA2AP08217 269 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 BCL3P20749 454 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 PRSS8Q16651 343 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 DDA1Q9BW61 102 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 FAM86C1Q9NVL1 165 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 LRFN1Q9P244 771 aa13.11□□□□□ -0.31
SDF4-207ENST00000494748 RP1L1Q8IWN7 2480 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms