RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 C19orf12Q9NSK7 152 aa9.54□□□□□ -0.88
CHMP3-209ENST00000494623 LUZP4Q9P127 313 aa9.54□□□□□ -0.88
CHMP3-209ENST00000494623 ARHGAP21Q5T5U3 1957 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 LYZL6O75951 148 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 SNCAP37840 140 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 UBE2NP61088 152 aaKnown RBP9.53□□□□□ -0.88
CHMP3-209ENST00000494623 B2MP61769 119 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 SRSF6Q13247 344 aaKnown RBP9.53□□□□□ -0.88
CHMP3-209ENST00000494623 ALKBH6Q3KRA9 238 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 LINC00596Q86U02 117 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 OR51H1Q8NH63 302 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 LYPD6BQ8NI32 183 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 PKIBQ9C010 78 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
CHMP3-209ENST00000494623 GP6Q9HCN6 339 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 OR2W1Q9Y3N9 320 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 J3QT63 122 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 WISP2O76076 250 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 CST7O76096 145 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 VDAC1P21796 283 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 UCP1P25874 307 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 GUK1Q16774 197 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 ZNF324BQ6AW86 544 aaPredicted RBP9.53□□□□□ -0.88
CHMP3-209ENST00000494623 WDR86Q86TI4 376 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 SCCPDHQ8NBX0 429 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 RTL8AQ9BWD3 113 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 PLEKHF2Q9H8W4 249 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 CDH20Q9HBT6 801 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 OR1A1Q9P1Q5 309 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 ESPL1Q14674 2120 aa9.53□□□□□ -0.88
CHMP3-209ENST00000494623 PROB1E7EW31 1015 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 CDIPTO14735 213 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 CHST1O43916 411 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 GRPP07492 148 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF14P17017 642 aaPredicted RBP9.52□□□□□ -0.89
CHMP3-209ENST00000494623 EPHA1P21709 976 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 IGHV1-2P23083 117 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 TNFSF10P50591 281 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 SOX8P57073 446 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 PPP1CBP62140 327 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 HLA-DRB3P79483 266 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 Q6P435 159 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 TMEM252Q8N6L7 170 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 TMEM217Q8N7C4 229 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 FAM213BQ8TBF2 198 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 GTF3AQ92664 365 aaKnown RBP9.52□□□□□ -0.89
CHMP3-209ENST00000494623 TRIB1Q96RU8 372 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 C11orf1Q9H5F2 150 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 ZDHHC11Q9H8X9 412 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 NDRG3Q9UGV2 375 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 MLXQ9UH92 298 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 FAM157AC9JC47 383 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 WRBO00258 174 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 SELEP16581 610 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 F2RP25116 425 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 S100GP29377 79 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 AKR1C3P42330 323 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 MRPL49Q13405 166 aaKnown RBP9.52□□□□□ -0.89
CHMP3-209ENST00000494623 NMSQ5H8A3 153 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 ETV3LQ6ZN32 361 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 GMPPAQ96IJ6 420 aaPredicted RBP9.52□□□□□ -0.89
CHMP3-209ENST00000494623 SAV1Q9H4B6 383 aaPredicted RBP9.52□□□□□ -0.89
CHMP3-209ENST00000494623 TRAPPC2LQ9UL33 140 aa9.52□□□□□ -0.89
CHMP3-209ENST00000494623 RBM7Q9Y580 266 aaKnown RBP9.52□□□□□ -0.89
CHMP3-209ENST00000494623 TRBV6-6A0A0A6YYG2 114 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 SMPD2O60906 423 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 TMEM50AO95807 157 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 OR2H2O95918 312 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 H2AFB1P0C5Y9 115 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 PSG2P11465 335 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 ID3Q02535 119 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 PEA15Q15121 130 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 IZUMO4Q1ZYL8 232 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 HFEQ30201 348 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 H1FOOQ8IZA3 346 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-209ENST00000494623 CNEP1R1Q8N9A8 125 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 OR5D13Q8NGL4 314 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 OR5C1Q8NGR4 320 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 OR10Z1Q8NGY1 313 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 OR2G3Q8NGZ4 309 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 PLPPR1Q8TBJ4 325 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 SLC25A40Q8TBP6 338 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 SLC25A31Q9H0C2 315 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-209ENST00000494623 PPP1R3CQ9UQK1 317 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 MED12LQ86YW9 2145 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 LOC400499M0QZD8 3231 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 A0A0G2JRQ6 117 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 H0Y980 276 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 H0YL77 283 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 HSPA12AO43301 675 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 SERPINE2P07093 398 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 ATP6V0CP27449 155 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 DYNLT3P51808 116 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 TGFBR3Q03167 851 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 ZNF880Q6PDB4 577 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 FIP1L1Q6UN15 594 aaKnown RBP9.51□□□□□ -0.89
CHMP3-209ENST00000494623 FDCSPQ8NFU4 85 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 OR1J1Q8NGS3 322 aa9.51□□□□□ -0.89
CHMP3-209ENST00000494623 TMEM171Q8WVE6 324 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms