RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ZNF44P15621 663 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 GZMHP20718 246 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 GNLYP22749 145 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 GNRHRP30968 328 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 FCGR2CP31995 323 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 EIF2B2P49770 351 aaKnown RBP5.67□□□□□ -1.5
MSH5-217ENST00000494458 NPY4RP50391 375 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 IL13RA1P78552 427 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 HLA-DRB3P79483 266 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 HTD2P86397 168 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 COL10A1Q03692 680 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 KCNJ8Q15842 424 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 C11orf71Q6IPW1 123 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 VHLLQ6RSH7 139 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 CLEC18BQ6UXF7 455 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 KCTD9Q7L273 389 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 MOGAT3Q86VF5 341 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 SLC38A6Q8IZM9 456 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 BATF2Q8N1L9 274 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 OR11H4Q8NGC9 324 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 OR5M8Q8NGP6 311 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 CORO2AQ92828 525 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 KAAG1Q9UBP8 84 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 RNF115Q9Y4L5 304 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 ANKHD1Q8IWZ3 2542 aaKnown RBP5.67□□□□□ -1.5
MSH5-217ENST00000494458 RELNP78509 3460 aa5.67□□□□□ -1.5
MSH5-217ENST00000494458 OOEPA6NGQ2 149 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 A6NLC8 198 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 HMSDA8MTL9 139 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 A8MV72 311 aaPredicted RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 M0R233 179 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 SIRPB1O00241 398 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 ITGB1BP1O14713 200 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 SSNA1O43805 119 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 B3GALNT1O75752 331 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 HLA-AP01891 365 aaKnown RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 TK1P04183 234 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 DANCRP0C864 163 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 ZNF728P0DKX0 622 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 AADACP22760 399 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 GLP1RP43220 463 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 UQCRFS1P47985 274 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 PPOXP50336 477 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 MRPS11P82912 194 aaKnown RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 HOXA4Q00056 320 aaPredicted RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 TLE1Q04724 770 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 EIF4EBP1Q13541 118 aaPredicted RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 TMEM187Q14656 261 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 ANKRD55Q3KP44 614 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 ZFP69Q49AA0 526 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 C4orf46Q504U0 113 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 Q5BKY6 102 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 TMEM65Q6PI78 240 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 TRAT1Q6PIZ9 186 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 C5orf24Q7Z6I8 188 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 TMED4Q7Z7H5 227 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 DTX2Q86UW9 622 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 FAM185AQ8N0U4 392 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 ZNF561Q8N587 486 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 UXS1Q8NBZ7 420 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 BVESQ8NE79 360 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 OR5D13Q8NGL4 314 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 IGFBPL1Q8WX77 278 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 NEUROG1Q92886 237 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 MSI2Q96DH6 328 aaKnown RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 TMEM56Q96MV1 263 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 PHB2Q99623 299 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 EGLN1Q9GZT9 426 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 RAB18Q9NP72 206 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 CISD1Q9NZ45 108 aaKnown RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 ZNF69Q9UC07 566 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 GAB2Q9UQC2 676 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 PPP1R3CQ9UQK1 317 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 OR2W1Q9Y3N9 320 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 TMEM56-RWDD3S4R434 201 aa5.66□□□□□ -1.5
MSH5-217ENST00000494458 SMG1Q96Q15 3661 aaKnown RBP5.66□□□□□ -1.5
MSH5-217ENST00000494458 CHD3Q12873 2000 aaKnown RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 NBASA2RRP1 2371 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 IGKV1D-13A0A0B4J2D9 117 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 IGHV3-64DA0A0J9YX35 117 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 hCG_1807616A0A1W2PRN6 198 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 CLEC18AA5D8T8 446 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 B8ZZF3 427 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 C12orf77C9JDV5 145 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 LGALS8O00214 317 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 F2RL2O00254 374 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 RGS13O14921 159 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 SIGLEC5O15389 551 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 MPPED1O15442 326 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 FCN3O75636 299 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 SLC22A5O76082 557 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 IGKV1-13P0DP09 117 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 SLC25A4P12235 298 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 LYL1P12980 280 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 AKR1C4P17516 323 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 NFYAP23511 347 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 CD34P28906 385 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 GLIPR1P48060 266 aa5.65□□□□□ -1.5
MSH5-217ENST00000494458 CEBPDP49716 269 aaPredicted RBP5.65□□□□□ -1.5
MSH5-217ENST00000494458 LOXL3P58215 753 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms