RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 TMEM155Q4W5P6 130 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 KRBOX4Q5JUW0 171 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 LYPD2Q6UXB3 125 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 ZNF782Q6ZMW2 699 aaPredicted RBP10.51□□□□□ -0.73
VPS52-220ENST00000493674 BTN2A1Q7KYR7 527 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 TCF23Q7RTU1 214 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 SLC36A1Q7Z2H8 476 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 MUC20Q8N307 709 aaPredicted RBP10.51□□□□□ -0.73
VPS52-220ENST00000493674 OR4A4PQ8NGN8 299 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 OR13C8Q8NGS7 320 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 CREB3L1Q96BA8 519 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 CCL19Q99731 98 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 PRRT1Q99946 306 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 MCUBQ9NWR8 336 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 NUBP2Q9Y5Y2 271 aa10.51□□□□□ -0.73
VPS52-220ENST00000493674 CR1P17927 2039 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 CSMD2Q7Z408 3487 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 A0A0B4J293 547 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 A0A1B0GVG6 124 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 F5H0A9 414 aaPredicted RBP10.5□□□□□ -0.73
VPS52-220ENST00000493674 CGB3P0DN86 165 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 CGB7P0DN87 165 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 MECP2P51608 486 aaKnown RBP10.5□□□□□ -0.73
VPS52-220ENST00000493674 RAG2P55895 527 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 RBMS2Q15434 407 aaKnown RBP10.5□□□□□ -0.73
VPS52-220ENST00000493674 TRAT1Q6PIZ9 186 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 DHRS11Q6UWP2 260 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 TMEM185AQ8NFB2 350 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 OR13A1Q8NGR1 328 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 LURAP1Q96LR2 239 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 MMP28Q9H239 520 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 LIME1Q9H400 295 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 NECAP2Q9NVZ3 263 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 EHFQ9NZC4 300 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 OPN4Q9UHM6 478 aa10.5□□□□□ -0.73
VPS52-220ENST00000493674 MEIKINA0A087WXM9 373 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 TRBV6-7A0A0A0MS04 114 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 FUOMA2VDF0 154 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 C12orf77C9JDV5 145 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 C15orf65H3BRN8 121 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 SDCBPO00560 298 aaPredicted RBP10.49□□□□□ -0.73
VPS52-220ENST00000493674 TMPRSS2O15393 492 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 ADAM20O43506 726 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 TUSC2O75896 110 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 SCTP09683 121 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 CTXN2P0C2S0 81 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 OR5H8P0DN80 308 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 OR3A3P47888 321 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 ARPC4P59998 168 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 IGSF11Q5DX21 431 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 C6orf183Q5T699 404 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 AADACL3Q5VUY0 350 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 PLET1Q6UQ28 207 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 ZNF841Q6ZN19 808 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 IDO2Q6ZQW0 420 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 C5orf24Q7Z6I8 188 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 PEG10Q86TG7 708 aaKnown RBP10.49□□□□□ -0.73
VPS52-220ENST00000493674 FGFRL1Q8N441 504 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 CCDC107Q8WV48 283 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 CORO2AQ92828 525 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 RAB1CQ92928 201 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 TIMD4Q96H15 378 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 SLC25A21Q9BQT8 299 aaPredicted RBP10.49□□□□□ -0.73
VPS52-220ENST00000493674 TOLLIPQ9H0E2 274 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 C20orf85Q9H1P6 137 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 LINC00574Q9H8X3 128 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 NUDT15Q9NV35 164 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 SLC25A10Q9UBX3 287 aaPredicted RBP10.49□□□□□ -0.73
VPS52-220ENST00000493674 SCP2D1Q9UJQ7 156 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 TRAPPC2LQ9UL33 140 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 AKAP9Q99996 3911 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 WNK2Q9Y3S1 2297 aa10.49□□□□□ -0.73
VPS52-220ENST00000493674 TRAV39A0A0B4J263 110 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 IFNA6P05013 189 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 MEF2CQ06413 473 aaPredicted RBP10.48□□□□□ -0.73
VPS52-220ENST00000493674 EDDM3AQ14507 147 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 AVPI1Q5T686 147 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 TMEM17Q86X19 198 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 TPRX1Q8N7U7 411 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 TERB2Q8NHR7 220 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 GIMAP1Q8WWP7 306 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 GINS4Q9BRT9 223 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 DCTN5Q9BTE1 182 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 FXYD6Q9H0Q3 95 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 TAF9BQ9HBM6 251 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 OR6C3Q9NZP0 311 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 PCDHB10Q9UN67 800 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 MYO9AB2RTY4 2548 aa10.48□□□□□ -0.73
VPS52-220ENST00000493674 CCDC168Q8NDH2 2452 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 OR5H14A6NHG9 310 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 INMT-MINDY4F8WBC2 141 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 F2RL2O00254 374 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 DVL1O14640 695 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 PPIHO43447 177 aaKnown RBP10.47□□□□□ -0.73
VPS52-220ENST00000493674 NDUFB3O43676 98 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 WNT2P09544 360 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 H2AFB2P0C5Z0 115 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 LRRC10Q5BKY1 277 aa10.47□□□□□ -0.73
VPS52-220ENST00000493674 H1FOOQ8IZA3 346 aaPredicted RBP10.47□□□□□ -0.73
VPS52-220ENST00000493674 SPICQ8N5J4 248 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms