RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 LIMS3P0CW19 117 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 LIMS4P0CW20 117 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 MYCNOSP40205 109 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 KCNJ3P48549 501 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 HSPA13P48723 471 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 DCTN2Q13561 401 aaKnown RBP8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 KLHL22Q53GT1 634 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 ZNF529Q6P280 563 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 UNQ9370/PRO34162Q6UXP9 181 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 SLC16A12Q6ZSM3 486 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 MOB3BQ86TA1 216 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 ZNF695Q8IW36 515 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 STPG2Q8N412 459 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 COMMD1Q8N668 190 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 PACRGLQ8N7B6 248 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 SUMF2Q8NBJ7 301 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 GPR148Q8TDV2 347 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 RGP1Q92546 391 aaPredicted RBP8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 DUX3Q96PT4 197 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 P2RX4Q99571 388 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 SLC29A1Q99808 456 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 Q9H521 79 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 FAM118AQ9NWS6 357 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 ING4Q9UNL4 249 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 ST3GAL6Q9Y274 331 aa8.1□□□□□ -1.11
NUDCD3-210ENST00000493613 IGHV1-3A0A0C4DH29 117 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 NCBP2LA6PVI3 153 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 CCRL2O00421 344 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 CASQ2O14958 399 aaPredicted RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 CSTBP04080 98 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 GAPDHP04406 335 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 VSIG8P0DPA2 414 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 ZNF93P35789 620 aaPredicted RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 REG1BP48304 166 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 RAB25P57735 213 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 PPP3R1P63098 170 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 ZNF816Q0VGE8 651 aaPredicted RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 EBI3Q14213 229 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 SMN1Q16637 294 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 DDI2Q5TDH0 399 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 XAF1Q6GPH4 301 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 RPL22L1Q6P5R6 122 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 TEX38Q6PEX7 206 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 ASCL4Q6XD76 172 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 Q8NFD4 153 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 OR52N1Q8NH53 320 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 UBALD1Q8TB05 177 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 CCDC107Q8WV48 283 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 APH1BQ8WW43 257 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 TMEM106AQ96A25 262 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 EAF1Q96JC9 268 aaPredicted RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 WWC2-AS2Q96NR7 200 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 S100A13Q99584 98 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 METTL9Q9H1A3 318 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 TMEM138Q9NPI0 162 aa8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 MRPS18AQ9NVS2 196 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 ZMAT5Q9UDW3 170 aaKnown RBP8.09□□□□□ -1.11
NUDCD3-210ENST00000493613 IGHV3-72A0A0B4J1Y9 119 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 TMEM30CPA0ZSE6 113 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 LINC01548A6NM66 108 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 CCL24O00175 119 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 AP4M1O00189 453 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 SDCBPO00560 298 aaPredicted RBP8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 GEMIN2O14893 280 aaKnown RBP8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 GZMHP20718 246 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 SERPINA2P20848 420 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 ETV1P50549 477 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 RBM11P57052 281 aaKnown RBP8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 DGCR2P98153 550 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 CCDC58Q4VC31 144 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 ATAD3CQ5T2N8 411 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 OGFRL1Q5TC84 451 aaPredicted RBP8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 OR2G6Q5TZ20 316 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 TMPRSS11AQ6ZMR5 421 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 TGIF2LXQ8IUE1 241 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 IZUMO1Q8IYV9 350 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 OR2T10Q8NGZ9 312 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 NEK7Q8TDX7 302 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 TFAP2CQ92754 450 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 ARL11Q969Q4 196 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 ORAI1Q96D31 301 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 RAX2Q96IS3 184 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 GON7Q9BXV9 100 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 ABCG5Q9H222 651 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 IFT22Q9H7X7 185 aa8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 LIN7CQ9NUP9 197 aaKnown RBP8.08□□□□□ -1.12
NUDCD3-210ENST00000493613 RYR3Q15413 4870 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 WBP4O75554 376 aaKnown RBP8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 RPLP1P05386 114 aaKnown RBP8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 BDKRB2P30411 391 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 GPR12P47775 334 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 GP2P55259 537 aaKnown RBP8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 PNLIPRP3Q17RR3 467 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 DEFB136Q30KP8 78 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 SLC22A6Q4U2R8 563 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 NHLRC3Q5JS37 347 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 FAM53AQ6NSI3 398 aaPredicted RBP8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 IZUMO2Q6UXV1 221 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 LCNL1Q6ZST4 164 aa8.07□□□□□ -1.12
NUDCD3-210ENST00000493613 LINC00596Q86U02 117 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms