RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GID8Q9NWU2 228 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 C1orf123Q9NWV4 160 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 THUMPD1Q9NXG2 353 aaKnown RBP2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CLEC5AQ9NY25 188 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 KLHL21Q9UJP4 597 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 SLC22A13Q9Y226 551 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 RHBDD3Q9Y3P4 386 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 INSIG2Q9Y5U4 225 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 NPTNQ9Y639 398 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 CDH10Q9Y6N8 788 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 TNCP24821 2201 aa2.25□□□□□ -2.05
PTCD3-218ENST00000493430 PRKDCP78527 4128 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ANK2Q01484 3957 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 TRAV39A0A0B4J263 110 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 hCG_38984A0A1B0GV85 526 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 GGT3PA6NGU5 568 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 A6NIZ1 184 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CD300LBA8K4G0 201 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF850A8MQ14 1090 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 IQCF6A8MYZ5 107 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 B4DSR2 109 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 H3BN98 237 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 NDUFS8O00217 210 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 XKRYO14609 159 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 AKR7A2O43488 359 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CHST1O43916 411 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CCDC22O60826 627 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 GLCEO94923 617 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 RPP14O95059 124 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CCNB2O95067 398 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 PTBP3O95758 552 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CSN3P07498 182 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 WNT2P09544 360 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 HSD17B1P14061 328 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ANPEPP15144 967 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CCL3L1P16619 93 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 KITLGP21583 273 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SLC2A5P22732 501 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 COX7A1P24310 79 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CD24P25063 80 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 AZGP1P25311 298 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 IER3P46695 156 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CDX1P47902 265 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 PITPNBP48739 271 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 DAPP51397 102 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 RIDAP52758 137 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 RAP1BP61224 184 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 RPS23P62266 143 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ARF6P62330 175 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 RAP1AP62834 184 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 CBX1P83916 185 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 FAM3AP98173 230 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SCRN3Q0VDG4 424 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 TSPAN31Q12999 210 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF154Q13106 437 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 PRDX4Q13162 271 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 APOFQ13790 326 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 GINS1Q14691 196 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 OR8G1Q15617 311 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 OR8B8Q15620 311 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 TAF9Q16594 264 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 DGUOKQ16854 277 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 TP53I3Q53FA7 332 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 METTL21CQ5VZV1 264 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 LPCAT4Q643R3 524 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 WDR25Q64LD2 544 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 OR2T5Q6IEZ7 315 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 LCN8Q6JVE9 175 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 C10orf99Q6UWK7 81 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 WDR82Q6UXN9 313 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 C12orf54Q6X4T0 127 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 HACD2Q6Y1H2 254 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 TCF23Q7RTU1 214 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 MRPL21Q7Z2W9 205 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ARPINQ7Z6K5 226 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SPATA24Q86W54 205 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 BPIFB2Q8N4F0 458 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 ZNF540Q8NDQ6 660 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 OR8G5Q8NG78 346 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 OR4M1Q8NGD0 313 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 OR2T29Q8NH02 315 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 GNPDA2Q8TDQ7 276 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 TMEM158Q8WZ71 300 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 H1FXQ92522 213 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 LHX4Q969G2 390 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SGK3Q96BR1 496 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SPACA5Q96QH8 159 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 RBP7Q96R05 134 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 OR5M11Q96RB7 305 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 IL4I1Q96RQ9 567 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 GPX7Q96SL4 187 aaPredicted RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 APOL4Q9BPW4 351 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SLC30A2Q9BRI3 323 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 COPS4Q9BT78 406 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 NMNAT2Q9BZQ4 307 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 BCL2L14Q9BZR8 327 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 SP140LQ9H930 580 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 PATZ1Q9HBE1 687 aaKnown RBP2.24□□□□□ -2.05
PTCD3-218ENST00000493430 C19orf12Q9NSK7 152 aa2.24□□□□□ -2.05
PTCD3-218ENST00000493430 PDP1Q9P0J1 537 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms