RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 CSTBP04080 98 aaKnown RBP5.49□□□□□ -1.53
VPS52-219ENST00000493379 TFAP2AP05549 437 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 SMIM18P0DKX4 95 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 CALRP27797 417 aaKnown RBP5.49□□□□□ -1.53
VPS52-219ENST00000493379 PSMB9P28065 219 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 HTR2CP28335 458 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 DUSP1P28562 367 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 ALDH3B2P48448 385 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 CEBPDP49716 269 aaPredicted RBP5.49□□□□□ -1.53
VPS52-219ENST00000493379 UBE2E1P51965 193 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 GMFBP60983 142 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 ARF6P62330 175 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 SCGB2A2Q13296 93 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 UNC119Q13432 240 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 TMEM95Q3KNT9 176 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 RSBN1Q5VWQ0 802 aaPredicted RBP5.49□□□□□ -1.53
VPS52-219ENST00000493379 SLC35E4Q6ICL7 350 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 OR2W3Q7Z3T1 314 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 JAGN1Q8N5M9 183 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 OR13F1Q8NGS4 319 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 KCNG3Q8TAE7 436 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 ST8SIA4Q92187 359 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 SPACA1Q9HBV2 294 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 OR14J1Q9UGF5 321 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 HSF4Q9ULV5 492 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 GSTK1Q9Y2Q3 226 aa5.49□□□□□ -1.53
VPS52-219ENST00000493379 UBE2J1Q9Y385 318 aaPredicted RBP5.49□□□□□ -1.53
VPS52-219ENST00000493379 TRBV6-6A0A0A6YYG2 114 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 A0A1W2PP11 408 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 A0A1W2PPH5 198 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 hADV38S2A0JD32 116 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 UBE2QL1A1L167 161 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 CLDN34H7C241 214 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 AIPO00170 330 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 PDCD5O14737 125 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 GEMIN2O14893 280 aaKnown RBP5.48□□□□□ -1.53
VPS52-219ENST00000493379 ZNF728P0DKX0 622 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 MGMTP16455 207 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 CD36P16671 472 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 NDUFB7P17568 137 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 RAB3BP20337 219 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 GZMHP20718 246 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 FUT3P21217 361 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 CD34P28906 385 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 COMPP49747 757 aaPredicted RBP5.48□□□□□ -1.53
VPS52-219ENST00000493379 P2RX3P56373 397 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 RPS27AP62979 156 aaKnown RBP5.48□□□□□ -1.53
VPS52-219ENST00000493379 ACTG1P63261 375 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 PMS2P11Q13670 270 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 ZNF273Q14593 569 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 GRK1Q15835 563 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 C2orf76Q3KRA6 126 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 PIGYQ3MUY2 71 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 TIMM50Q3ZCQ8 353 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 SLC22A6Q4U2R8 563 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 METTL11BQ5VVY1 283 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 C22orf42Q6IC83 251 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 HEPN1Q6WQI6 88 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 SLC16A12Q6ZSM3 486 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 GDPD3Q7L5L3 318 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 ZNF554Q86TJ5 538 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 BATF2Q8N1L9 274 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 ASCC1Q8N9N2 400 aaKnown RBP5.48□□□□□ -1.53
VPS52-219ENST00000493379 TMEM185AQ8NFB2 350 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 OR11H6Q8NGC7 330 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 OR10A7Q8NGE5 316 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 OR10K1Q8NGX5 313 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 ZFAND2BQ8WV99 257 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 FAM3DQ96BQ1 224 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 S100A13Q99584 98 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 BARHL1Q9BZE3 327 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 CST11Q9H112 138 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 LPAR5Q9H1C0 372 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 MEGF9Q9H1U4 602 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 OR51E2Q9H255 320 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 ZNF69Q9UC07 566 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 STEAP1Q9UHE8 339 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 SSR3Q9UNL2 185 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 AK6Q9Y3D8 172 aaKnown RBP5.48□□□□□ -1.53
VPS52-219ENST00000493379 COL7A1Q02388 2944 aa5.48□□□□□ -1.53
VPS52-219ENST00000493379 IGHV1-69DA0A0B4J2H0 117 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 KBTBD11-OT1A0A1B0GTJ5 212 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 hCG_1809904A0A1W2PP81 198 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 A0A1W2PPE2 198 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 A0A1W2PR64 198 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 A0A1W2PRV1 198 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ODAMA1E959 279 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ZNF729A6NN14 1252 aaPredicted RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 RNASEK-C17orf49H0YIS7 233 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 HOXA3O43365 443 aaPredicted RBP5.47□□□□□ -1.53
VPS52-219ENST00000493379 TCF21O43680 179 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ORC5O43913 435 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 PDCD6O75340 191 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 IGHV1-69P01742 117 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 MT-ND4P03905 459 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 IGHV1-8P0DP01 117 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 IGHV4-38-2P0DP08 117 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 CALCBP10092 127 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ZNF44P15621 663 aa5.47□□□□□ -1.53
VPS52-219ENST00000493379 ARSBP15848 533 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms