RNA–Protein interactions for RNA: ENST00000491857.1

PSMD4-212, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 461 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-212ENST00000491857 ZMAT4Q9H898 229 aa13.22□□□□□ -0.29
PSMD4-212ENST00000491857 ZNF580Q9UK33 172 aa13.22□□□□□ -0.29
PSMD4-212ENST00000491857 LCE6AA0A183 80 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 DAPL1A0PJW8 107 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 TXNL1O43396 289 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 IGF1P05019 195 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 GZMHP20718 246 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 ZSCAN26Q16670 478 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 C8orf31Q8N9H6 132 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 OR52M1Q8NGK5 317 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 RTN4IP1Q8WWV3 396 aaPredicted RBP13.21□□□□□ -0.29
PSMD4-212ENST00000491857 MYCBPQ99417 103 aaPredicted RBP13.21□□□□□ -0.29
PSMD4-212ENST00000491857 GPER1Q99527 375 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 CIB1Q99828 191 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 CHCHD6Q9BRQ6 235 aa13.21□□□□□ -0.29
PSMD4-212ENST00000491857 OR4C45A6NMZ5 311 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 MAGEB3O15480 346 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 ZNF616Q08AN1 781 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 ALKBH1Q13686 389 aaKnown RBP13.2□□□□□ -0.3
PSMD4-212ENST00000491857 RSU1Q15404 277 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 TMEM65Q6PI78 240 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 FAM71E2Q8N5Q1 922 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 TMEM104Q8NE00 496 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 RNFT2Q96EX2 444 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 MRPL48Q96GC5 212 aaKnown RBP13.2□□□□□ -0.3
PSMD4-212ENST00000491857 UBE2E2Q96LR5 201 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 KCTD7Q96MP8 289 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 HSPB9Q9BQS6 159 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 DPCDQ9BVM2 203 aaPredicted RBP13.2□□□□□ -0.3
PSMD4-212ENST00000491857 GABARAPL3Q9BY60 117 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 RIBC2Q9H4K1 309 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 ISYNA1Q9NPH2 558 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 PLSCR3Q9NRY6 295 aa13.2□□□□□ -0.3
PSMD4-212ENST00000491857 TRAV39A0A0B4J263 110 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 SDCBPO00560 298 aaPredicted RBP13.19□□□□□ -0.3
PSMD4-212ENST00000491857 FASP25445 335 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 RUNX1Q01196 453 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 Q3ZCU0 254 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 PARP16Q8N5Y8 322 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 SUMF2Q8NBJ7 301 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 OR1N2Q8NGR9 330 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 MYOZ3Q8TDC0 251 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 TNFAIP8L1Q8WVP5 186 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 ARL11Q969Q4 196 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 PELI1Q96FA3 418 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 VSIG4Q9Y279 399 aa13.19□□□□□ -0.3
PSMD4-212ENST00000491857 TMEM30CPA0ZSE6 113 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 J3QLW9 94 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 ZNF19P17023 458 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 RAB3AP20336 220 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 POLR2IP36954 125 aaKnown RBP13.18□□□□□ -0.3
PSMD4-212ENST00000491857 PIGYQ3MUY2 71 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 LPCAT4Q643R3 524 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 ACBD7Q8N6N7 88 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 TRUB1Q8WWH5 349 aaKnown RBP13.18□□□□□ -0.3
PSMD4-212ENST00000491857 ST6GALNAC6Q969X2 333 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 C4orf36Q96KX1 117 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 IFT22Q9H7X7 185 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 IMPAD1Q9NX62 359 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 GFOD1Q9NXC2 390 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 ZNF107Q9UII5 783 aaPredicted RBP13.18□□□□□ -0.3
PSMD4-212ENST00000491857 DHDHQ9UQ10 334 aa13.18□□□□□ -0.3
PSMD4-212ENST00000491857 DNAH1Q9P2D7 4330 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 TMEM212A6NML5 194 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 I3L521 148 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 J3QRE1 110 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 GABRPO00591 440 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 OVOL1O14753 267 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 ORC5O43913 435 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
PSMD4-212ENST00000491857 FRMD6-AS1P0C7T7 363 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 OVCH2Q7RTZ1 564 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 SATL1Q86VE3 508 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 ZNF491Q8N8L2 437 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 OR10K1Q8NGX5 313 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 TSEN15Q8WW01 171 aaKnown RBP13.17□□□□□ -0.3
PSMD4-212ENST00000491857 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 GNB4Q9HAV0 340 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 RAB9BQ9NP90 201 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 ST3GAL6Q9Y274 331 aa13.17□□□□□ -0.3
PSMD4-212ENST00000491857 SNTNA6NMZ2 147 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 ZNF736B4DX44 427 aaPredicted RBP13.16□□□□□ -0.3
PSMD4-212ENST00000491857 C15orf65H3BRN8 121 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 SAP30O75446 220 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 HTR3BO95264 441 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 FCGR1AP12314 374 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 F2RL1P55085 397 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 ASPHD1Q5U4P2 390 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 MEDAGQ5VYS4 303 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 LINC00596Q86U02 117 aa13.16□□□□□ -0.3
PSMD4-212ENST00000491857 STARD9Q9P2P6 4700 aa13.15□□□□□ -0.3
PSMD4-212ENST00000491857 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
PSMD4-212ENST00000491857 IGHV3-43A0A0B4J1X8 118 aa13.15□□□□□ -0.3
PSMD4-212ENST00000491857 CSTBP04080 98 aaKnown RBP13.15□□□□□ -0.3
PSMD4-212ENST00000491857 IGHV3-43DP0DP04 118 aa13.15□□□□□ -0.3
PSMD4-212ENST00000491857 SLC2A2P11168 524 aaPredicted RBP13.15□□□□□ -0.3
PSMD4-212ENST00000491857 GP9P14770 177 aa13.15□□□□□ -0.3
PSMD4-212ENST00000491857 SPNP16150 400 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms