RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 HSD17B6O14756 317 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 OGG1O15527 345 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 MAS1P04201 325 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 RPLP1P05386 114 aaKnown RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 IGFBP3P17936 291 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 RCC1P18754 421 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 CNTFRP26992 372 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 BDKRB2P30411 391 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 PRRX1P54821 245 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 F2RL1P55085 397 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 OR10K2Q6IF99 312 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 RPL22L1Q6P5R6 122 aaKnown RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 MRPL41Q8IXM3 137 aaKnown RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 CHST4Q8NCG5 386 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 WFDC9Q8NEX5 89 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 Q8NFD4 153 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 GPR148Q8TDV2 347 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 NEK7Q8TDX7 302 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 ARL11Q969Q4 196 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 FAM46BQ96A09 425 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 EAF1Q96JC9 268 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 Q96MT0 163 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 SMPD3Q9NY59 655 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 OR6C3Q9NZP0 311 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 MOB4Q9Y3A3 225 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 RPL36Q9Y3U8 105 aaKnown RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 PCDHGB5Q9Y5G0 923 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
HDAC3-211ENST00000491581 HSPE1-MOB4S4R3N1 261 aa7.02□□□□□ -1.29
HDAC3-211ENST00000491581 TRBV5-5A0A0J9YX44 114 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 FUOMA2VDF0 154 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 SERPINE3A8MV23 424 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 C12orf77C9JDV5 145 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 ST8SIA5O15466 376 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 ALX3O95076 343 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 MT-ND4P03905 459 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 C21orf33P30042 268 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-211ENST00000491581 CEACAM3P40198 252 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 MNDAP41218 407 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 GP2P55259 537 aaKnown RBP7.01□□□□□ -1.29
HDAC3-211ENST00000491581 MADCAM1Q13477 382 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 IL13RA2Q14627 380 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 KLHL22Q53GT1 634 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 DEFB121Q5J5C9 76 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 DMKNQ6E0U4 476 aaPredicted RBP7.01□□□□□ -1.29
HDAC3-211ENST00000491581 SIGIRRQ6IA17 410 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 GLIPR1L1Q6UWM5 242 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 OR2W3Q7Z3T1 314 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 Q8N9W7 124 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 KLHL30-AS1Q8NEE0 82 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 OR10X1Q8NGY0 326 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 CASTOR1Q8WTX7 329 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 SMIM19Q96E16 107 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 BARHL1Q9BZE3 327 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 METTL9Q9H1A3 318 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 PLSCR3Q9NRY6 295 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 BABAM2Q9NXR7 383 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 ZNF281Q9Y2X9 895 aa7.01□□□□□ -1.29
HDAC3-211ENST00000491581 TRBV5-7A0A0A0MS05 114 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 TMEM30CPA0ZSE6 113 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 SNTNA6NMZ2 147 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 NCBP2LA6PVI3 153 aaKnown RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 AIPO00170 330 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 CCRL2O00421 344 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 MAGEB3O15480 346 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 MPZL2O60487 215 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 CSTBP04080 98 aaKnown RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 FAM106CPP0CH98 169 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 SLC2A2P11168 524 aaPredicted RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 THBS3P49746 956 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 LUMP51884 338 aaPredicted RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 RAB25P57735 213 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 RPL23AP62750 156 aaKnown RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 ST3GAL4Q11206 333 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 RIPK1Q13546 671 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 RCN1Q15293 331 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 CT45A1Q5HYN5 189 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 SYT6Q5T7P8 510 aaPredicted RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 ZNF497Q6ZNH5 498 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 AHSA2Q719I0 299 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 C16orf82Q7Z2V1 217 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 SLC35E3Q7Z769 313 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 LYPD6Q86Y78 171 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 JAGN1Q8N5M9 183 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 Q8N6K4 173 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 ZNF565Q8N9K5 539 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 ZNF439Q8NDP4 499 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 ZNF555Q8NEP9 628 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 OR4X2Q8NGF9 303 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 OR52L2PQ8NGH6 319 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 CT45A3Q8NHU0 189 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 RTN4IP1Q8WWV3 396 aaPredicted RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 ST6GALNAC6Q969X2 333 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 RAX2Q96IS3 184 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 PARP12Q9H0J9 701 aaKnown RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 TMEM138Q9NPI0 162 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 GFOD1Q9NXC2 390 aa7□□□□□ -1.29
HDAC3-211ENST00000491581 DIMT1Q9UNQ2 313 aaKnown RBP7□□□□□ -1.29
HDAC3-211ENST00000491581 MRPS28Q9Y2Q9 187 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms