RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 SLC16A12Q6ZSM3 486 aa16.62■□□□□ 0.25
SYNE4-205ENST00000490730 SMIM19Q96E16 107 aa16.62■□□□□ 0.25
SYNE4-205ENST00000490730 ZNF184Q99676 751 aaPredicted RBP16.62■□□□□ 0.25
SYNE4-205ENST00000490730 IFT22Q9H7X7 185 aa16.62■□□□□ 0.25
SYNE4-205ENST00000490730 BABAM2Q9NXR7 383 aa16.62■□□□□ 0.25
SYNE4-205ENST00000490730 CKLFQ9UBR5 152 aa16.62■□□□□ 0.25
SYNE4-205ENST00000490730 IGHV3-72A0A0B4J1Y9 119 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 IRGMA1A4Y4 181 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 CCRL2O00421 344 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 SDCBPO00560 298 aaPredicted RBP16.61■□□□□ 0.25
SYNE4-205ENST00000490730 GZMHP20718 246 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 NHLRC3Q5JS37 347 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 LINC00596Q86U02 117 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 ZFP41Q8N8Y5 198 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 CHPT1Q8WUD6 406 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 CYGBQ8WWM9 190 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 ARL11Q969Q4 196 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 CHCHD3Q9NX63 227 aaKnown RBP16.61■□□□□ 0.25
SYNE4-205ENST00000490730 CLEC2DQ9UHP7 191 aa16.61■□□□□ 0.25
SYNE4-205ENST00000490730 EXOSC1Q9Y3B2 195 aaKnown RBP16.61■□□□□ 0.25
SYNE4-205ENST00000490730 IGHV3-43A0A0B4J1X8 118 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 A0A1W2PP11 408 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 NUDT19A8MXV4 375 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 OGG1O15527 345 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 LALBAP00709 142 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 IGHV3-43DP0DP04 118 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 SLC35E3Q7Z769 313 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 OR51D1Q8NGF3 324 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 GHSRQ92847 366 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 RDH12Q96NR8 316 aa16.6■□□□□ 0.25
SYNE4-205ENST00000490730 DIMT1Q9UNQ2 313 aaKnown RBP16.6■□□□□ 0.25
SYNE4-205ENST00000490730 IGHV1-3A0A0C4DH29 117 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 MAGEA13PA6NCF6 341 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 NCBP2LA6PVI3 153 aaKnown RBP16.59■□□□□ 0.25
SYNE4-205ENST00000490730 AIPO00170 330 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 FGF16O43320 207 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 ZNF780AO75290 641 aaPredicted RBP16.59■□□□□ 0.25
SYNE4-205ENST00000490730 DUS4LO95620 317 aaKnown RBP16.59■□□□□ 0.25
SYNE4-205ENST00000490730 GAPDHP04406 335 aaKnown RBP16.59■□□□□ 0.25
SYNE4-205ENST00000490730 GTF2F2P13984 249 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 HOXD3P31249 432 aaPredicted RBP16.59■□□□□ 0.25
SYNE4-205ENST00000490730 RPL23AP62750 156 aaKnown RBP16.59■□□□□ 0.25
SYNE4-205ENST00000490730 SLC35B1P78383 322 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 ZNF816Q0VGE8 651 aaPredicted RBP16.59■□□□□ 0.25
SYNE4-205ENST00000490730 LRRC36Q1X8D7 754 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 MPV17LQ2QL34 196 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 FOXRED2Q8IWF2 684 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 STX19Q8N4C7 294 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 JAGN1Q8N5M9 183 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 LINC00482Q8N8I6 264 aa16.59■□□□□ 0.25
SYNE4-205ENST00000490730 A0A1W2PPK0 400 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 K7EIL1 84 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 EBAG9O00559 213 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 IL3RAP26951 378 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 KRTAP10-11P60412 298 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 MED21Q13503 144 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 Q499Y3 187 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 DEFB121Q5J5C9 76 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 FAM53AQ6NSI3 398 aaPredicted RBP16.58■□□□□ 0.24
SYNE4-205ENST00000490730 C18orf65Q6ZTR6 163 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 C8orf86Q6ZUL3 223 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 MRPL41Q8IXM3 137 aaKnown RBP16.58■□□□□ 0.24
SYNE4-205ENST00000490730 KLHL30-AS1Q8NEE0 82 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 DPF1Q92782 380 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 MUL1Q969V5 352 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 TMEM80Q96HE8 168 aa16.58■□□□□ 0.24
SYNE4-205ENST00000490730 TRAV8-7A0A075B6U6 113 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 TRBV5-5A0A0J9YX44 114 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 PNMA8CA0A1B0GUJ8 204 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 C15orf65H3BRN8 121 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 IGFBP3P17936 291 aaPredicted RBP16.57■□□□□ 0.24
SYNE4-205ENST00000490730 YIF1BQ5BJH7 314 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 DMKNQ6E0U4 476 aaPredicted RBP16.57■□□□□ 0.24
SYNE4-205ENST00000490730 ETV3LQ6ZN32 361 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 OR2W3Q7Z3T1 314 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 PRR18Q8N4B5 295 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 OR52M1Q8NGK5 317 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 EAF1Q96JC9 268 aaPredicted RBP16.57■□□□□ 0.24
SYNE4-205ENST00000490730 GFOD1Q9NXC2 390 aa16.57■□□□□ 0.24
SYNE4-205ENST00000490730 MRPS28Q9Y2Q9 187 aaKnown RBP16.57■□□□□ 0.24
SYNE4-205ENST00000490730 ORC5O43913 435 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 IGHG2P01859 326 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 MT-ND4P03905 459 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 GPR176Q14439 515 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 TTC23Q5W5X9 447 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 GLIPR1L1Q6UWM5 242 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 ZNF497Q6ZNH5 498 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 STPG2Q8N412 459 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 SETD9Q8NE22 299 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 OR2T10Q8NGZ9 312 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 OR14A2Q96R54 314 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 SPACA1Q9HBV2 294 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 ETAA1Q9NY74 926 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 GNG12Q9UBI6 72 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 TRAPPC2LQ9UL33 140 aa16.56■□□□□ 0.24
SYNE4-205ENST00000490730 WI2-2373I1.2A0A1W2PRP0 233 aa16.55■□□□□ 0.24
SYNE4-205ENST00000490730 LINC01548A6NM66 108 aa16.55■□□□□ 0.24
SYNE4-205ENST00000490730 MCRIP1C9JLW8 97 aa16.55■□□□□ 0.24
SYNE4-205ENST00000490730 MAS1P04201 325 aa16.55■□□□□ 0.24
SYNE4-205ENST00000490730 THBS3P49746 956 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms