RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 TRAV24A0A0B4J272 114 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 M0R129 80 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 JTBO76095 146 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 CCR9P51686 369 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 GALEQ14376 348 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 KISS1Q15726 138 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 OR13C3Q8NGS6 347 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 OR13C9Q8NGT0 318 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 DCUN1D4Q92564 292 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 ZCCHC4Q9H5U6 513 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 GNB4Q9HAV0 340 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 FRRS1LQ9P0K9 344 aa15.29■□□□□ 0.04
UPK3B-205ENST00000490360 ZNF107Q9UII5 783 aaPredicted RBP15.29■□□□□ 0.04
UPK3B-205ENST00000490360 A0A1W2PPE3 182 aa15.28■□□□□ 0.04
UPK3B-205ENST00000490360 FKBP6O75344 327 aa15.28■□□□□ 0.04
UPK3B-205ENST00000490360 CALB2P22676 271 aa15.28■□□□□ 0.04
UPK3B-205ENST00000490360 GABPB1Q06547 395 aaPredicted RBP15.28■□□□□ 0.04
UPK3B-205ENST00000490360 KIAA0141Q14154 515 aaPredicted RBP15.28■□□□□ 0.04
UPK3B-205ENST00000490360 LYPD6Q86Y78 171 aa15.28■□□□□ 0.04
UPK3B-205ENST00000490360 PXT1Q8NFP0 134 aa15.28■□□□□ 0.04
UPK3B-205ENST00000490360 RFKQ969G6 155 aa15.28■□□□□ 0.04
UPK3B-205ENST00000490360 ST6GALNAC6Q969X2 333 aa15.28■□□□□ 0.04
UPK3B-205ENST00000490360 NR1H4Q96RI1 486 aaPredicted RBP15.28■□□□□ 0.04
UPK3B-205ENST00000490360 A8MZ25 164 aa15.27■□□□□ 0.04
UPK3B-205ENST00000490360 IGLV1-40P01703 118 aa15.27■□□□□ 0.04
UPK3B-205ENST00000490360 PPIFP30405 207 aaKnown RBP15.27■□□□□ 0.04
UPK3B-205ENST00000490360 TP53I3Q53FA7 332 aa15.27■□□□□ 0.04
UPK3B-205ENST00000490360 ADAMTSL5Q6ZMM2 481 aa15.27■□□□□ 0.04
UPK3B-205ENST00000490360 OR5D14Q8NGL3 314 aa15.27■□□□□ 0.04
UPK3B-205ENST00000490360 RNF166Q96A37 237 aaPredicted RBP15.27■□□□□ 0.04
UPK3B-205ENST00000490360 KLK15Q9H2R5 256 aa15.27■□□□□ 0.04
UPK3B-205ENST00000490360 OR8U9P0C7N5 309 aa15.26■□□□□ 0.03
UPK3B-205ENST00000490360 GNB1P62873 340 aa15.26■□□□□ 0.03
UPK3B-205ENST00000490360 ACSM6Q6P461 480 aa15.26■□□□□ 0.03
UPK3B-205ENST00000490360 SPATA24Q86W54 205 aa15.26■□□□□ 0.03
UPK3B-205ENST00000490360 SERPINA12Q8IW75 414 aa15.26■□□□□ 0.03
UPK3B-205ENST00000490360 PLPPR1Q8TBJ4 325 aa15.26■□□□□ 0.03
UPK3B-205ENST00000490360 MRPS28Q9Y2Q9 187 aaKnown RBP15.26■□□□□ 0.03
UPK3B-205ENST00000490360 STARD9Q9P2P6 4700 aa15.26■□□□□ 0.03
UPK3B-205ENST00000490360 FAM90A10PA6NDY2 464 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 TRIM64CA6NLI5 447 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 SDCBPO00560 298 aaPredicted RBP15.25■□□□□ 0.03
UPK3B-205ENST00000490360 SULT1B1O43704 296 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 ORC5O43913 435 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 HTR1AP08908 422 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 EPHA2P29317 976 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 RAB9AP51151 201 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 ZNF137PP52743 207 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 F2RL1P55085 397 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 ZNF85Q03923 595 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 ZNF691Q5VV52 312 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 DLX4Q92988 240 aaPredicted RBP15.25■□□□□ 0.03
UPK3B-205ENST00000490360 EME1Q96AY2 570 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 DPCDQ9BVM2 203 aaPredicted RBP15.25■□□□□ 0.03
UPK3B-205ENST00000490360 IFT22Q9H7X7 185 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 RAB9BQ9NP90 201 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 GFOD1Q9NXC2 390 aa15.25■□□□□ 0.03
UPK3B-205ENST00000490360 TMEM30CPA0ZSE6 113 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 LINC01619G3V211 115 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 ARPC1BO15143 372 aaKnown RBP15.24■□□□□ 0.03
UPK3B-205ENST00000490360 TMEM30BQ3MIR4 351 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 SGPP2Q8IWX5 399 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 OR8J1Q8NGP2 316 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 IL17DQ8TAD2 202 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 ARL11Q969Q4 196 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 OR5B12Q96R08 314 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 OR4C12Q96R67 309 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 SPATA25Q9BR10 227 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 THTPAQ9BU02 230 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 ERGIC3Q9Y282 383 aa15.24■□□□□ 0.03
UPK3B-205ENST00000490360 C15orf65H3BRN8 121 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 SLC16A6O15403 523 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 MAGEB3O15480 346 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 IFNA6P05013 189 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 IGHV4-30-4P0DP06 118 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 NANOS3P60323 173 aaKnown RBP15.23■□□□□ 0.03
UPK3B-205ENST00000490360 FLOT2Q14254 428 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 STEAP3Q658P3 488 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 SLC25A48Q6ZT89 311 aaKnown RBP15.23■□□□□ 0.03
UPK3B-205ENST00000490360 PARP16Q8N5Y8 322 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 SUMF2Q8NBJ7 301 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 OR51A4Q8NGJ6 313 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 MYCBPQ99417 103 aaPredicted RBP15.23■□□□□ 0.03
UPK3B-205ENST00000490360 C19orf73Q9NVV2 129 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 WSB1Q9Y6I7 421 aa15.23■□□□□ 0.03
UPK3B-205ENST00000490360 TRAV41A0A0B4J266 112 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 TCRBV3S1A0A5B6 114 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 MAGEA13PA6NCF6 341 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 ZNF736B4DX44 427 aaPredicted RBP15.22■□□□□ 0.03
UPK3B-205ENST00000490360 G3V2T6 193 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 MITFO75030 526 aaPredicted RBP15.22■□□□□ 0.03
UPK3B-205ENST00000490360 HLA-DRB1P01911 266 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 PITPNAQ00169 270 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 RSU1Q15404 277 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 MMDQ15546 238 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 SRSF7Q16629 238 aaKnown RBP eCLIP15.22■□□□□ 0.03
UPK3B-205ENST00000490360 KDM4DQ6B0I6 523 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 OR10AC1Q8NH08 325 aa15.22■□□□□ 0.03
UPK3B-205ENST00000490360 TRAV39A0A0B4J263 110 aa15.21■□□□□ 0.03
UPK3B-205ENST00000490360 OR4C45A6NMZ5 311 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms