RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 FAM90A23PA8MXZ1 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 H0YHG0 523 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 M0QZK8 103 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 OR2F2O95006 317 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 IGHV3-7P01780 117 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A15PP0C7V4 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A13PP0C7W8 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A14PP0C7W9 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 FAM90A24PP0C7X0 464 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 MGMTP16455 207 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 CD24P25063 80 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 BLCAPP62952 87 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 GPR50Q13585 617 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 RAB12Q6IQ22 244 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 UFD1Q92890 307 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 LEAP2Q969E1 77 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 OR5M11Q96RB7 305 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 CST11Q9H112 138 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 ETAA1Q9NY74 926 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 TRAPPC2LQ9UL33 140 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 PSG11Q9UQ72 335 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 KIAA2026Q5HYC2 2103 aa13.99□□□□□ -0.17
SEC13-218ENST00000490283 LY6LH3BQJ8 138 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 SDCBPO00560 298 aaPredicted RBP13.98□□□□□ -0.17
SEC13-218ENST00000490283 PIN1P1O15428 100 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 ORC5O43913 435 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 UBBP0CG47 229 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 HSPA13P48723 471 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 RAB7AP51149 207 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 DEFA6Q01524 100 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 RBM48Q5RL73 367 aaKnown RBP13.98□□□□□ -0.17
SEC13-218ENST00000490283 GLT8D1Q68CQ7 371 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 ZNF497Q6ZNH5 498 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 CCDC107Q8WV48 283 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 NRG4Q8WWG1 115 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 RBM14Q96PK6 669 aaKnown RBP13.98□□□□□ -0.17
SEC13-218ENST00000490283 BANF2Q9H503 90 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 RCC2Q9P258 522 aaKnown RBP13.98□□□□□ -0.17
SEC13-218ENST00000490283 PEX16Q9Y5Y5 336 aa13.98□□□□□ -0.17
SEC13-218ENST00000490283 ERICH4A6NGS2 130 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 SPINT2O43291 252 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 RGS10O43665 173 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 CA11O75493 328 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 MT-ND4P03905 459 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 MYF6P23409 242 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 IL3RAP26951 378 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 HES1Q14469 280 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 TMEM30BQ3MIR4 351 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 HSD17B12Q53GQ0 312 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 C6orf183Q5T699 404 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 TRAT1Q6PIZ9 186 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 OR8H3Q8N146 312 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 OR52M1Q8NGK5 317 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 PHYHIPQ92561 330 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 ANKRD60Q9BZ19 345 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 CCDC90BQ9GZT6 254 aa13.97□□□□□ -0.17
SEC13-218ENST00000490283 TET2Q6N021 2002 aaPredicted RBP13.97□□□□□ -0.17
SEC13-218ENST00000490283 GLAP06280 429 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 HSMCR30P0CW71 290 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 FUT3P21217 361 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 SLC35A2P78381 396 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 EMX1Q04741 257 aaPredicted RBP13.96□□□□□ -0.17
SEC13-218ENST00000490283 ABCA11PQ4W5N1 156 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 UTF1Q5T230 341 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 CEACAM19Q7Z692 300 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 THNSL2Q86YJ6 484 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 OR56B4Q8NH76 319 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 Q96M66 194 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 LSM2Q9Y333 95 aaKnown RBP13.96□□□□□ -0.17
SEC13-218ENST00000490283 MOB4Q9Y3A3 225 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 PKD1L1Q8TDX9 2849 aa13.96□□□□□ -0.17
SEC13-218ENST00000490283 WIPF1O43516 503 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 MPIG6BO95866 241 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 LPLP06858 475 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 SNRNP70P08621 437 aaKnown RBP13.95□□□□□ -0.18
SEC13-218ENST00000490283 CD28P10747 220 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 INSL4Q14641 139 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 TRAM1Q15629 374 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 NSUN5P1Q3KNT7 163 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 TMEM95Q3KNT9 176 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 C9orf152Q5JTZ5 239 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 SYT6Q5T7P8 510 aaPredicted RBP13.95□□□□□ -0.18
SEC13-218ENST00000490283 LIPKQ5VXJ0 399 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 UNQ9370/PRO34162Q6UXP9 181 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 NDUFA11Q86Y39 141 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 DRAM1Q8N682 238 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 TMEM104Q8NE00 496 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 FAM46BQ96A09 425 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 NEDD4LQ96PU5 975 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 WNT10AQ9GZT5 417 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 GFOD1Q9NXC2 390 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 KCNIP1Q9NZI2 227 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 GNG12Q9UBI6 72 aa13.95□□□□□ -0.18
SEC13-218ENST00000490283 WNK1Q9H4A3 2382 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 A0A1W2PPE3 182 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 C15orf65H3BRN8 121 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 CCRL2O00421 344 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 HSD17B6O14756 317 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 PDCD6O75340 191 aa13.94□□□□□ -0.18
SEC13-218ENST00000490283 GAPDHP04406 335 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms