RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TBX5Q99593 518 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 HSPB9Q9BQS6 159 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 BARHL1Q9BZE3 327 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 FAM107BQ9H098 131 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ISYNA1Q9NPH2 558 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ING3Q9NXR8 418 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 ARL2BPQ9Y2Y0 163 aa6.36□□□□□ -1.39
USP39-216ENST00000490193 PLECQ15149 4684 aaKnown RBP6.35□□□□□ -1.39
USP39-216ENST00000490193 IGHV3-72A0A0B4J1Y9 119 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 TRAV24A0A0B4J272 114 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 A8MZ25 164 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 H0YJX3 145 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 OVOL1O14753 267 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 LDLRAD4O15165 306 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 MOSP00540 346 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 IGLV1-40P01703 118 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 GP9P14770 177 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 SPNP16150 400 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 ZNF20P17024 532 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 SSTR5P35346 364 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 SOX6P35712 828 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 DAPP51397 102 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 ZNF137PP52743 207 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 ZP1P60852 638 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 IL13RA2Q14627 380 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 Q3ZCU0 254 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 PAN3Q58A45 887 aaKnown RBP6.35□□□□□ -1.39
USP39-216ENST00000490193 OR52M1Q8NGK5 317 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 OR5D18Q8NGL1 313 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 OR1N2Q8NGR9 330 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 OR2G2Q8NGZ5 317 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 RFESDQ8TAC1 157 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 CNIH3Q8TBE1 160 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 PLPPR1Q8TBJ4 325 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 RTN4IP1Q8WWV3 396 aaPredicted RBP6.35□□□□□ -1.39
USP39-216ENST00000490193 CCDC124Q96CT7 223 aaKnown RBP6.35□□□□□ -1.39
USP39-216ENST00000490193 KCTD7Q96MP8 289 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 SPACA5Q96QH8 159 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 RASL11BQ9BPW5 248 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 GNB4Q9HAV0 340 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 NEK6Q9HC98 313 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 VSIG4Q9Y279 399 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 MYRFQ9Y2G1 1151 aa6.35□□□□□ -1.39
USP39-216ENST00000490193 FAM90A10PA6NDY2 464 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 TRIM64CA6NLI5 447 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 TXNL1O43396 289 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 FKBP6O75344 327 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 FAM107AO95990 144 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 OCM2P0CE71 109 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 OCMP0CE72 109 aaPredicted RBP6.34□□□□□ -1.39
USP39-216ENST00000490193 GZMHP20718 246 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 EPHA2P29317 976 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 REG1BP48304 166 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 CCR9P51686 369 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 GNB1P62873 340 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 ZNF85Q03923 595 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 TMED1Q13445 227 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 GALEQ14376 348 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 LTC4SQ16873 150 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 ACSM6Q6P461 480 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 ADAMTSL5Q6ZMM2 481 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 FAM220AQ7Z4H9 259 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 PXT1Q8NFP0 134 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 OR10H4Q8NGA5 316 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 OR6Q1Q8NGQ2 317 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 OR13C9Q8NGT0 318 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 MRGPRDQ8TDS7 321 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 DCUN1D4Q92564 292 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 UTP4Q969X6 686 aaKnown RBP6.34□□□□□ -1.39
USP39-216ENST00000490193 KLK15Q9H2R5 256 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 OR51J1Q9H342 316 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 C19orf73Q9NVV2 129 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 FRRS1LQ9P0K9 344 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 GNG8Q9UK08 70 aa6.34□□□□□ -1.39
USP39-216ENST00000490193 A0A1W2PPE3 182 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 ZNF736B4DX44 427 aaPredicted RBP6.33□□□□□ -1.4
USP39-216ENST00000490193 C15orf65H3BRN8 121 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 HSPB6O14558 160 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 SAP30O75446 220 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 IGHV4-30-4P0DP06 118 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 TMEM225BP0DP42 221 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 IL3RAP26951 378 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 VHLP40337 213 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 F2RL1P55085 397 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 NANOS3P60323 173 aaKnown RBP6.33□□□□□ -1.4
USP39-216ENST00000490193 KISS1Q15726 138 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 TP53I3Q53FA7 332 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 TMEM65Q6PI78 240 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 KCTD20Q7Z5Y7 419 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 LYPD6Q86Y78 171 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 Q8N1Y9 231 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 OR51A4Q8NGJ6 313 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 OR10AC1Q8NH08 325 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 DLX4Q92988 240 aaPredicted RBP6.33□□□□□ -1.4
USP39-216ENST00000490193 NSL1Q96IY1 281 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 IL4I1Q96RQ9 567 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 ZCCHC4Q9H5U6 513 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 IFT22Q9H7X7 185 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 FAM118AQ9NWS6 357 aa6.33□□□□□ -1.4
USP39-216ENST00000490193 ZNF107Q9UII5 783 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms