RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CLDN18P56856 261 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 PKIAP61925 76 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF273Q14593 569 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 MARS2Q96GW9 593 aaKnown RBP7.79□□□□□ -1.16
LSAMP-205ENST00000490035 LOXL4Q96JB6 756 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 GREB1LQ9C091 1923 aaPredicted RBP7.79□□□□□ -1.16
LSAMP-205ENST00000490035 RPL36A-HNRNPH2H7BZ11 118 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 M0R296 226 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 NPY1RP25929 384 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 SP6Q3SY56 376 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 KRTCAP3Q53RY4 240 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM116Q8NCL8 245 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 OR1B1Q8NGR6 318 aa7.79□□□□□ -1.16
LSAMP-205ENST00000490035 SYNGR1O43759 233 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 COL8A1P27658 744 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 IRF3Q14653 427 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 HOGA1Q86XE5 327 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 NPVFQ9HCQ7 196 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 ONECUT2O95948 504 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 DAOP14920 347 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 SAXO1Q8IYX7 474 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM70Q9BUB7 260 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 APC2O95996 2303 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 SPNP16150 400 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 C10orf113Q5VZT2 155 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 SEZ6L2Q6UXD5 910 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 MYEOVQ96EZ4 313 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 SLC6A13Q9NSD5 602 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 A0A1W2PS18 150 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TCRBV16S1A1N1A0A5B0 115 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 HPXP02790 462 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 ERVFRD-1P60508 538 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TRIP6Q15654 476 aaKnown RBP7.78□□□□□ -1.16
LSAMP-205ENST00000490035 BLNKQ8WV28 456 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM208Q9BTX3 173 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TNFSF18Q9UNG2 199 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF318Q5VUA4 2279 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TRBV5-3A0A0A0MS03 114 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 OR4C45A6NMZ5 311 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 HBZP02008 142 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 ACAA1P09110 424 aaPredicted RBP7.78□□□□□ -1.16
LSAMP-205ENST00000490035 RPS20P60866 119 aaKnown RBP7.78□□□□□ -1.16
LSAMP-205ENST00000490035 HLA-DRB5Q30154 266 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 SARGQ9BW04 601 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 HPRT1P00492 218 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 CD99P14209 185 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TEX30Q5JUR7 227 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 VN1R4Q7Z5H5 301 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM190Q8WZ59 177 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 H0Y980 276 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 KLF9Q13886 244 aaPredicted RBP7.78□□□□□ -1.16
LSAMP-205ENST00000490035 CYB5R2Q6BCY4 276 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 SHISA5Q8N114 240 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 DTD1Q8TEA8 209 aa7.78□□□□□ -1.16
LSAMP-205ENST00000490035 TRBV9A0A0B4J1U6 114 aa7.77□□□□□ -1.16
LSAMP-205ENST00000490035 TMPRSS2O15393 492 aa7.77□□□□□ -1.16
LSAMP-205ENST00000490035 RPS27P42677 84 aaKnown RBP7.77□□□□□ -1.16
LSAMP-205ENST00000490035 FMODQ06828 376 aa7.77□□□□□ -1.16
LSAMP-205ENST00000490035 GAMTQ14353 236 aa7.77□□□□□ -1.16
LSAMP-205ENST00000490035 SLC25A22Q9H936 323 aa7.77□□□□□ -1.16
LSAMP-205ENST00000490035 F2RL2O00254 374 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 FBXW9Q5XUX1 488 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 SNRNP40Q96DI7 357 aaKnown RBP7.77□□□□□ -1.17
LSAMP-205ENST00000490035 ZFP30Q9Y2G7 519 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 BRWD3Q6RI45 1802 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 J3QW42 95 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 SCO1O75880 301 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 TGFBR1P36897 503 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 PPOXP50336 477 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 FAM27BQ5VT28 67 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 BATF2Q8N1L9 274 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 V9GYH0 126 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 THADAQ6YHU6 1953 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 A0A1B0GTL3 188 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 A8MWL6 223 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 F5H697 171 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 CHST1O43916 411 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 PSG6Q00889 435 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 CLEC18BQ6UXF7 455 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 TGIF2LYQ8IUE0 185 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 TGIF2LXQ8IUE1 241 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 ZDHHC8Q9ULC8 765 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 LIFP15018 202 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.77□□□□□ -1.17
LSAMP-205ENST00000490035 FAM24BQ8N5W8 94 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 NUDT8Q8WV74 236 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 CCL17Q92583 94 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 MOGAT1Q96PD6 335 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 CFHR5Q9BXR6 569 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 OR2H1Q9GZK4 316 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 HSF4Q9ULV5 492 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 CBY3A6NI87 242 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 TIAL1Q01085 375 aaKnown RBP eCLIP7.77□□□□□ -1.17
LSAMP-205ENST00000490035 GCSAMQ8N6F7 178 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 GPX7Q96SL4 187 aaPredicted RBP7.77□□□□□ -1.17
LSAMP-205ENST00000490035 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 NTMQ9P121 344 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 GNG10P50151 68 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 PMCHL1Q16048 86 aa7.77□□□□□ -1.17
LSAMP-205ENST00000490035 MTURNQ8N3F0 131 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms