RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 EXOSC1Q9Y3B2 195 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1B-202ENST00000489921 LINC01548A6NM66 108 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 FGF16O43320 207 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 IGKV1D-33P01593 117 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 IGKV1-33P01594 117 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 MT-ND4P03905 459 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 TMEM11P17152 192 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 GZMHP20718 246 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 SERPINA2P20848 420 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 PPP3R1P63098 170 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 ADARB1P78563 741 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 ZNF816Q0VGE8 651 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 LAIR2Q6ISS4 152 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 ZNF497Q6ZNH5 498 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 LINC00596Q86U02 117 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 LYPD6Q86Y78 171 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 LINC00311Q8N616 119 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 ZFP41Q8N8Y5 198 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 UBALD1Q8TB05 177 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 GGHQ92820 318 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 ST6GALNAC6Q969X2 333 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 CYYR1Q96J86 154 aa15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 ZNF184Q99676 751 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1B-202ENST00000489921 TRBV5-7A0A0A0MS05 114 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 IGHV1-3A0A0C4DH29 117 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 TMEM30CPA0ZSE6 113 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 PSMB11A5LHX3 300 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 K7EIL1 84 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 PF4P02776 101 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 CSTBP04080 98 aaKnown RBP15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 SLC35A2P78381 396 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 RIPK1Q13546 671 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 MPV17LQ2QL34 196 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 C18orf65Q6ZTR6 163 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 Q8N6K4 173 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 LINC00482Q8N8I6 264 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 OR52M1Q8NGK5 317 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 OR10X1Q8NGY0 326 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 CCDC107Q8WV48 283 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 TMEM80Q96HE8 168 aa15.33■□□□□ 0.04
TNFRSF1B-202ENST00000489921 HSD17B6O14756 317 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 IGHG2P01859 326 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 REG1BP48304 166 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 HES1Q14469 280 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 Q499Y3 187 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 SLC22A6Q4U2R8 563 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ATAD3CQ5T2N8 411 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 C8orf31Q8N9H6 132 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 TMEM104Q8NE00 496 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ARL11Q969Q4 196 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 RBMXL1Q96E39 390 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 RCC1LQ96I51 464 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 EAF1Q96JC9 268 aaPredicted RBP15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 RCC2Q9P258 522 aaKnown RBP15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 LINC00527Q9UJ94 153 aa15.32■□□□□ 0.04
TNFRSF1B-202ENST00000489921 IGHV3-72A0A0B4J1Y9 119 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 IRGMA1A4Y4 181 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 CCRL2O00421 344 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ORC5O43913 435 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ZNF780AO75290 641 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 GTF2F2P13984 249 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 MYL12AP19105 171 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 FSTP19883 344 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ZNF134P52741 427 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 RPL23AP62750 156 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 LRRC36Q1X8D7 754 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 YIF1BQ5BJH7 314 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 MRPL41Q8IXM3 137 aaKnown RBP15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 GAPTQ8N292 157 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 CHPT1Q8WUD6 406 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 CYGBQ8WWM9 190 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 PLSCR3Q9NRY6 295 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 PAK1IP1Q9NWT1 392 aaPredicted RBP15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 GFOD1Q9NXC2 390 aa15.31■□□□□ 0.04
TNFRSF1B-202ENST00000489921 IGHV3-43A0A0B4J1X8 118 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 A0A1W2PPK0 400 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 EBAG9O00559 213 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 SDCBPO00560 298 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 SLC31A2O15432 143 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 MPIG6BO95866 241 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 GAPDHP04406 335 aaKnown RBP15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 IGHV3-43DP0DP04 118 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 EGFEM1PQ0D2K5 195 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ST3GAL4Q11206 333 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 KHDC1LQ5JSQ8 128 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 TTC23Q5W5X9 447 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 IZUMO1Q8IYV9 350 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 Q8N9W7 124 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ZNF439Q8NDP4 499 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 RTN4IP1Q8WWV3 396 aaPredicted RBP15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 MUL1Q969V5 352 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 OR14A2Q96R54 314 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 S100A13Q99584 98 aa15.3■□□□□ 0.04
TNFRSF1B-202ENST00000489921 KMT2CQ8NEZ4 4911 aaKnown RBP15.29■□□□□ 0.04
TNFRSF1B-202ENST00000489921 WI2-2373I1.2A0A1W2PRP0 233 aa15.29■□□□□ 0.04
TNFRSF1B-202ENST00000489921 SERPINE3A8MV23 424 aa15.29■□□□□ 0.04
TNFRSF1B-202ENST00000489921 ZNF736B4DX44 427 aaPredicted RBP15.29■□□□□ 0.04
TNFRSF1B-202ENST00000489921 C12orf77C9JDV5 145 aa15.29■□□□□ 0.04
TNFRSF1B-202ENST00000489921 GNAO1P09471 354 aa15.29■□□□□ 0.04
TNFRSF1B-202ENST00000489921 VHLP40337 213 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms