RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	PARP11	Q9NR21	331 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	ZFP57	Q9NU63	452 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	IL36G	Q9NZH8	169 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	IGKV3D-15	A0A087WSY6	115 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	TRAV24	A0A0B4J272	114 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	TRDC	B7Z8K6	153 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	CDIPT	O14735	213 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	DVL1P1	P54792	670 aa	Predicted RBP	13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	HAGH	Q16775	308 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	BOD1	Q96IK1	185 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	GLRX2	Q9NS18	164 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	RNF150	Q9ULK6	438 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	TMED3	Q9Y3Q3	217 aa		13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
BRD9-208	ENST00000489816	GAPDH	P04406	335 aa	Known RBP	13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	ATP6V0C	P27449	155 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	P2RY1	P47900	373 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	TMEM45B	Q96B21	275 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	CACFD1	Q9UGQ2	172 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	KCNS2	Q9ULS6	477 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	WDR1	O75083	606 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	NAPSA	O96009	420 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	DANCR	P0C864	163 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	SP9	P0CG40	484 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	PSG2	P11465	335 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	DYNLT3	P51808	116 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	FAM58A	Q8N1B3	248 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	OR4D5	Q8NGN0	318 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	IER2	Q9BTL4	223 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	FAM86C1	Q9NVL1	165 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	LUZP4	Q9P127	313 aa		13.39	□□□□□ -0.27
BRD9-208	ENST00000489816	SNCA	P37840	140 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	RPS16	P62249	146 aa	Known RBP	13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	TMEM267	Q0VDI3	215 aa	Predicted RBP	13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	AWAT1	Q58HT5	328 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	TMEM252	Q8N6L7	170 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	PLPPR2	Q96GM1	343 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	SPRR3	Q9UBC9	169 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	IAPP	P10997	89 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	C10orf91	Q5T1B1	145 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	ZNF826P	Q6ZT77	177 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	CNEP1R1	Q8N9A8	125 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	POMT1	Q9Y6A1	747 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	DEGS1	O15121	323 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	AGFG2	O95081	481 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	OR1K1	Q8NGR3	316 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	OR10J5	Q8NHC4	309 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	MRPL30	Q8TCC3	161 aa	Known RBP	13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	OR5P3	Q8WZ94	311 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816	DLL3	Q9NYJ7	618 aa		13.38	□□□□□ -0.27
BRD9-208	ENST00000489816		H0YL77	283 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	PGLYRP1	O75594	196 aa	Predicted RBP	13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	CCL11	P51671	97 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	PCSK4	Q6UW60	755 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	CMTM1	Q8IZ96	169 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	NDRG3	Q9UGV2	375 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816		A6NLC8	198 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	UMAD1	C9J7I0	102 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	IL13RA2	Q14627	380 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816		Q6ZRM9	215 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	TPRX1	Q8N7U7	411 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	UFSP2	Q9NUQ7	469 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	PRELID3B	Q9Y3B1	194 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	ATP23	Q9Y6H3	246 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	TPR	P12270	2363 aa	Known RBP	13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	PLCE1	Q9P212	2302 aa		13.37	□□□□□ -0.27
BRD9-208	ENST00000489816	hCG_1809904	A0A1W2PP81	198 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816		A0A1W2PR64	198 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816		A0A1W2PRV1	198 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	FAM157A	C9JC47	383 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	SERPINE2	P07093	398 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	FLI1	Q01543	452 aa	Predicted RBP	13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	SLC25A24	Q6NUK1	477 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	LRTM2	Q8N967	370 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	OR5A2	Q8NGI9	324 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	ZPBP	Q9BS86	351 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	DDA1	Q9BW61	102 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	TRAPPC2L	Q9UL33	140 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	ACACA	Q13085	2346 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816		A0A1W2PPE2	198 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	C7orf77	A4D0Y5	90 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	NKX2-8	O15522	239 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	TXNL1	O43396	289 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	TUSC2	O75896	110 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	RAB13	P51153	203 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	UCP3	P55916	312 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	LINC00205	P59089	165 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	GNG3	P63215	75 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	WDR86	Q86TI4	376 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	FAM24B	Q8N5W8	94 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	SFT2D1	Q8WV19	159 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	LINC00470	Q9BZP3	86 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816		A0A1W2PPH5	198 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	KLRC4-KLRK1	H3BQV0	150 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	SEC11B	P0C7V7	166 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	ARR3	P36575	388 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	OR2B8P	P59922	312 aa		13.36	□□□□□ -0.27
BRD9-208	ENST00000489816	ZNF528	Q3MIS6	628 aa		13.36	□□□□□ -0.27

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