RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 OR52L2PQ8NGH6 319 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 NDNFQ8TB73 568 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 PP6455Q8WZ26 134 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 EMG1Q92979 244 aaKnown RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 MYDGFQ969H8 173 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 ADAT3Q96EY9 351 aaPredicted RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 IL4I1Q96RQ9 567 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 CHST6Q9GZX3 395 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 LINC00574Q9H8X3 128 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 RHOFQ9HBH0 211 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 HMG20AQ9NP66 347 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 RBFOX1Q9NWB1 397 aaKnown RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 TAS2R3Q9NYW6 316 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 WARS2Q9UGM6 360 aaKnown RBP5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 GTF2A1LQ9UNN4 478 aa5.03□□□□□ -1.6
PRPF40A-210ENST00000489741 LOC107986453A0A1B0GWG9 222 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 TCRBV4S1A1TA0A5B7 111 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 FAM90A10PA6NDY2 464 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 LEUTXA8MZ59 168 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 OOSP1A8MZH6 123 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 E9PQ18 207 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 BUB1B-PAK6H3BSN5 160 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 SH2D1BO14796 132 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 PEX14O75381 377 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 KDM4BO94953 1096 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 DUS4LO95620 317 aaKnown RBP5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 OR2H2O95918 312 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ISG15P05161 165 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 KRT8P05787 483 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 CSN2P05814 226 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ATF1P18846 271 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 PRKACBP22694 351 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 GABRR1P24046 479 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 CDK2P24941 298 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 GLIPR1P48060 266 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ATP1B3P54709 279 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 MTCP1P56278 107 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 SLC35A2P78381 396 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF85Q03923 595 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 TMED1Q13445 227 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 EDDM3AQ14507 147 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ATP6AP1Q15904 470 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ODF4Q2M2E3 257 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 C17orf58Q2M2W7 97 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 HLA-DRB5Q30154 266 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ABCA11PQ4W5N1 156 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 SPIN3Q5JUX0 258 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 TPTE2P1Q5T6R2 138 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 PRAMEF5Q5TYX0 476 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 OR52W1Q6IF63 320 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 CCDC121Q6ZUS5 278 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 OR2G2Q8NGZ5 317 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 MPLKIPQ8TAP9 179 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF596Q8TC21 504 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 BCAS4Q8TDM0 211 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 EME1Q96AY2 570 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 FGGYQ96C11 551 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 BORCS8Q96FH0 119 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 COQ2Q96H96 371 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 AKR1E2Q96JD6 320 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 MBOAT4Q96T53 435 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 TBX5Q99593 518 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 SLC25A33Q9BSK2 321 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 PRRG3Q9BZD7 231 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 COMMD4Q9H0A8 199 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 GABARAPL1Q9H0R8 117 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 NCOR1P1Q9H4R4 102 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 ZNF286AQ9HBT8 521 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 KRT84Q9NSB2 600 aa5.02□□□□□ -1.61
PRPF40A-210ENST00000489741 TRGV10A0A0A0MS01 117 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 ODAMA1E959 279 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 G3V2T6 193 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 H3BSH0 61 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 M0QZK8 103 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 GYG2O15488 501 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 UBCP0CG48 685 aaKnown RBP5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 CALCBP10092 127 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 PRKACAP17612 351 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 BRS3P32247 399 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 THBS3P49746 956 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 CCR9P51686 369 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 LINC00205P59089 165 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 PAX5Q02548 391 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 AESQ08117 197 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 CDK5R1Q15078 307 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 DNAL1Q4LDG9 190 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 FAM209BQ5JX69 171 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 SLC25A30Q5SVS4 291 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 TMEM244Q5VVB8 128 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 SAXO1Q8IYX7 474 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 OSR2Q8N2R0 312 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 CHST4Q8NCG5 386 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 OR4X2Q8NGF9 303 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 OR8J1Q8NGP2 316 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 STMN2Q93045 179 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 CREB3L1Q96BA8 519 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 SPSB1Q96BD6 273 aa5.01□□□□□ -1.61
PRPF40A-210ENST00000489741 CIB1Q99828 191 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms