RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 ABRACLQ9P1F3 81 aa6.77□□□□□ -1.33
SF1-218ENST00000489544 ZNRD1Q9P1U0 126 aa6.77□□□□□ -1.33
SF1-218ENST00000489544 CDC42EP3Q9UKI2 254 aa6.77□□□□□ -1.33
SF1-218ENST00000489544 TRAPPC2LQ9UL33 140 aa6.77□□□□□ -1.33
SF1-218ENST00000489544 SPATA2Q9UM82 520 aa6.77□□□□□ -1.33
SF1-218ENST00000489544 UBE2J1Q9Y385 318 aaPredicted RBP6.77□□□□□ -1.33
SF1-218ENST00000489544 ETV7Q9Y603 341 aa6.77□□□□□ -1.33
SF1-218ENST00000489544 NSD1Q96L73 2696 aaPredicted RBP6.77□□□□□ -1.33
SF1-218ENST00000489544 KIAA2026Q5HYC2 2103 aa6.77□□□□□ -1.33
SF1-218ENST00000489544 NIPBLQ6KC79 2804 aaeCLIP6.76□□□□□ -1.33
SF1-218ENST00000489544 IGHV3-43A0A0B4J1X8 118 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 IGHV1-69DA0A0B4J2H0 117 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 KBTBD11-OT1A0A1B0GTJ5 212 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 METTL21EPA6NDL7 271 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 TMEM235A6NFC5 223 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 C12orf77C9JDV5 145 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 C15orf65H3BRN8 121 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 MFNGO00587 321 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 NOL3O60936 208 aaKnown RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 CLPXO76031 633 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 NAPSAO96009 420 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 IGHV1-69P01742 117 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 GLAP06280 429 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 EIF4EP06730 217 aaKnown RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 IGHV1-8P0DP01 117 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 IGHV3-43DP0DP04 118 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 HIST1H1DP16402 221 aaKnown RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 ZNF182P17025 639 aaPredicted RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 EPHA1P21709 976 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 NFYBP25208 207 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 PAX5Q02548 391 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 CDNFQ49AH0 187 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 GPR157Q5UAW9 335 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 C1orf122Q6ZSJ8 110 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 CROCCP3Q8IVE0 287 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 GAPTQ8N292 157 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 OR1L1Q8NH94 360 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 MAFIPQ8WZ33 124 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 PTX4Q96A99 478 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 ZNF48Q96MX3 618 aaPredicted RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 SLC6A7Q99884 636 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 CMSS1Q9BQ75 279 aaKnown RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 DCUN1D5Q9BTE7 237 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 UNKLQ9H9P5 680 aaKnown RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 CHMP1AQ9HD42 196 aaPredicted RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 TAS2R3Q9NYW6 316 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 LPAR3Q9UBY5 353 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 ZNF230Q9UIE0 474 aaPredicted RBP6.76□□□□□ -1.33
SF1-218ENST00000489544 NUP50Q9UKX7 468 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 HSF4Q9ULV5 492 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 DSCAML1Q8TD84 2053 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 CUBNO60494 3623 aa6.76□□□□□ -1.33
SF1-218ENST00000489544 DNHD1Q96M86 4753 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 TRAV18A0A075B6X5 111 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 A0A0U1RQK1 487 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 A0A1W2PPE3 182 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 A0A1W2PPH5 198 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 ZNF729A6NN14 1252 aaPredicted RBP6.75□□□□□ -1.33
SF1-218ENST00000489544 NPIPB11E5RHQ5 1161 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 CTDSP2O14595 271 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 FCER2P06734 321 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 FAM157CP0CG43 387 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 ELK1P19419 428 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 RANBP1P43487 201 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 SCAND1P57086 179 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 GNMTQ14749 295 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 ZNF260Q3ZCT1 412 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 UBE2NLQ5JXB2 153 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 LDLRAD2Q5SZI1 272 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 HEPN1Q6WQI6 88 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 LHFPL4Q7Z7J7 247 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 ZNF565Q8N9K5 539 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 NUDCD2Q8WVJ2 157 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 GCDHQ92947 438 aaPredicted RBP6.75□□□□□ -1.33
SF1-218ENST00000489544 ARL11Q969Q4 196 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 KIRREL1Q96J84 757 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 DMRTB1Q96MA1 342 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 BCL7BQ9BQE9 202 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 MS4A7Q9GZW8 240 aaPredicted RBP6.75□□□□□ -1.33
SF1-218ENST00000489544 ABCG5Q9H222 651 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 MIXL1Q9H2W2 232 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 GAL3ST2Q9H3Q3 398 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 NCOR1P1Q9H4R4 102 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 TAF9BQ9HBM6 251 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 ZNF286AQ9HBT8 521 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 MBNL3Q9NUK0 354 aaKnown RBP6.75□□□□□ -1.33
SF1-218ENST00000489544 IDI2-AS1Q9NZ38 188 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 RSL24D1Q9UHA3 163 aaKnown RBP6.75□□□□□ -1.33
SF1-218ENST00000489544 SESN1Q9Y6P5 492 aa6.75□□□□□ -1.33
SF1-218ENST00000489544 IGKV1D-8A0A087WSZ0 117 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 IGHV2-26A0A0B4J1V2 119 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 hCG_1809904A0A1W2PP81 198 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 A0A1W2PPE2 198 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 A0A1W2PR64 198 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 A0A1W2PRV1 198 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 MEIOCA2RUB1 952 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 H3BUI4 141 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 NPFFO15130 113 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 SSX5O60225 188 aa6.74□□□□□ -1.33
SF1-218ENST00000489544 CA11O75493 328 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms